Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_L20
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 115 9e-27
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 113 4e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 93 4e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 2e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 52 9e-08
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 33 0.035
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 32 0.082
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.14
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 1.0
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 28 1.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 28 1.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.1
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 4.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.1
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 27 4.1
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 4.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 5.4
SPAC1B2.04 |cox6||cytochrome c oxidase subunit VI|Schizosaccharo... 26 7.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 7.1
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 7.1
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 9.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 25 9.4
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 9.4
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 9.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 115 bits (276), Expect = 9e-27
Identities = 65/158 (41%), Positives = 86/158 (54%)
Frame = -2
Query: 792 FTTYFDNQPGVLXPSI*G*ACYDQR*QLAR*IRADRDPTRRRVACLKLRXXXXXXXXXXX 613
F+TY DNQPGVL G + L P R ++
Sbjct: 426 FSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGIL 484
Query: 612 XXPLSRSPPNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 433
K KITITNDKGRLS EEI+RMV EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYA 544
Query: 432 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 319
+S++++++D LK+K+ SDK+T+ +TI+WLDSN
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSN 582
Score = 62.5 bits (145), Expect = 7e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -1
Query: 685 GSHPAPRGVPQIEVTFDIDANGILNVSAIEKST 587
G PAPRGVPQIEVTFD+DANGILNVSA+EK T
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGT 493
Score = 52.0 bits (119), Expect = 9e-08
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 767 PXYSXQVFEGERAMTKDNNLLGKFELTGIPP 675
P QVFEGERA TKD NLLGKFEL+GIPP
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSGIPP 464
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -3
Query: 329 WIPTNWPX-KEEYEHKQKELEGICNPIITKMYQ 234
W+ +N K+E+E KQKELE + NPI+ K+YQ
Sbjct: 578 WLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 113 bits (271), Expect = 4e-26
Identities = 64/158 (40%), Positives = 85/158 (53%)
Frame = -2
Query: 792 FTTYFDNQPGVLXPSI*G*ACYDQR*QLAR*IRADRDPTRRRVACLKLRXXXXXXXXXXX 613
F+TY DNQPGVL G + L P R ++
Sbjct: 426 FSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR-GVPQIEVTFDVDANGIL 484
Query: 612 XXPLSRSPPNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 433
K KITITNDKGRLS EEI+RMV+EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYA 544
Query: 432 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 319
+S++++++D LK+K+ SDK+ I +TI+WLD N
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHN 582
Score = 62.5 bits (145), Expect = 7e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -1
Query: 685 GSHPAPRGVPQIEVTFDIDANGILNVSAIEKST 587
G PAPRGVPQIEVTFD+DANGILNVSA+EK T
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGT 493
Score = 52.0 bits (119), Expect = 9e-08
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 767 PXYSXQVFEGERAMTKDNNLLGKFELTGIPP 675
P QVFEGERA TKD NLLGKFEL+GIPP
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSGIPP 464
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -3
Query: 329 WIPTNWPX-KEEYEHKQKELEGICNPIITKMYQ 234
W+ N K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 578 WLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 93.1 bits (221), Expect = 4e-20
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = -2
Query: 603 LSRSPPNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 424
+ +S K K+ I NDKGRLS E+IERMV EAE++ ED KE I+A+N LE+Y +S+
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSL 577
Query: 423 KSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD 325
K +DE+L K+ DKQ +LD D +WL+
Sbjct: 578 KGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 685 GSHPAPRGVPQIEVTFDIDANGILNVSAIEKSTK 584
G PAPRGVPQIEVTF++DANG+L VSA++KS K
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGK 523
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = -3
Query: 752 QVFEGERAMTKDNNLLGKFELTGIPP 675
QV+EGER +TKDNNLLGKF+L GIPP
Sbjct: 468 QVYEGERTLTKDNNLLGKFDLRGIPP 493
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -3
Query: 305 KEEYEHKQKELEGICNPIITKMY 237
KEE+E ++++L+ + +PI K+Y
Sbjct: 619 KEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = -2
Query: 570 ITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 391
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 390 KISDSDKQTI---LDKCNDTIKWLDSN 319
K+ DK I L +C ++ D+N
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTN 590
Score = 46.4 bits (105), Expect = 5e-06
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = -1
Query: 685 GSHPAPRGVPQIEVTFDIDANGILNVSAIEKST 587
G P PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3
Query: 749 VFEGERAMTKDNNLLGKFELTGIPP 675
V++GER +N LG+F+LTGIPP
Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPP 469
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 52.0 bits (119), Expect = 9e-08
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = -1
Query: 685 GSHPAPRGVPQIEVTFDIDANGILNVSAIEKSTKQ 581
G PAP+G PQIEV+FD+DA+GI+NVSA +K+T +
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGIINVSARDKATNK 538
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -2
Query: 585 NKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 406
NK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 537 NKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDI 595
Query: 405 EKLKEKISDSDKQTILDKCND 343
K+K+ + + K D
Sbjct: 596 H--KDKLDQQAVEDLRSKITD 614
Score = 39.9 bits (89), Expect = 4e-04
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 752 QVFEGERAMTKDNNLLGKFELTGIPP 675
+VF+GER + +DN L+G F+LTGI P
Sbjct: 482 RVFQGERELVRDNKLIGNFQLTGIAP 507
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 33.5 bits (73), Expect = 0.035
Identities = 15/63 (23%), Positives = 37/63 (58%)
Frame = -2
Query: 540 SMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 361
++EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+
Sbjct: 17 ALEELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTL 76
Query: 360 LDK 352
++K
Sbjct: 77 INK 79
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.3 bits (70), Expect = 0.082
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -2
Query: 570 ITITNDKGRLSMEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED 406
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDD 596
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -2
Query: 552 KGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 373
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 372 KQTILDKCNDTIK 334
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -2
Query: 585 NKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 406
NK+ K T D S EE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 405 EKLKEKISD 379
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = -2
Query: 588 PNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 409
P+ + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 408 DEKLKEKISDSDKQTILDKCNDTIK 334
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 555 DKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 376
D+ ++EIE M + + + D + + N + CFS +ED K KE +SD
Sbjct: 208 DRTMEQLKEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDE 264
Query: 375 DKQT 364
K +
Sbjct: 265 MKSS 268
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -2
Query: 597 RSPPNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALE 442
R P+KE +G L +E E NEA++ NE+ E +N E
Sbjct: 78 RQSPSKEAPF----GEGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = -2
Query: 534 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 373
EE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1608 EELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 519 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 415
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = -2
Query: 597 RSPPNKENKITITNDKGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 418
+ P K T+ + ++E+ + E EK + +A+ A +
Sbjct: 209 QKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSA 268
Query: 417 TMEDEKLKEKISDSDKQ--TILDK 352
+E EK KEK D D++ T+ DK
Sbjct: 269 KLEKEKAKEKQKDKDQEQDTVSDK 292
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 489 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 328
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 591 PPNKENKITITNDK-GRLSMEEIERMVNEAEKYRNEDDK--QKETIQAKNALESYCFS 427
PPN + ND+ + + ++N + RN D+ QK T+Q +A+ CFS
Sbjct: 310 PPNILSMFPSYNDRLNAFGPLKFDALLNFITEMRNVVDQLYQKSTLQPNDAVPGLCFS 367
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 570 ITITND-KGRLSMEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 394
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 393 EKISDSDKQTILDKC 349
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 579 ENKITITNDKGRLSMEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 409
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC1B2.04 |cox6||cytochrome c oxidase subunit
VI|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 326 IPTNWPXKEEYEHKQKELEGICNPI 252
I P KE+Y+ KEL+ +CN +
Sbjct: 106 IKVKLPTKEQYQAYVKELKPVCNEL 130
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -2
Query: 534 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKE 391
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 263 KCLPILSACAHTPPXSASWLESSHLMVSLHLSRMV 367
+CL IL A H P + WL H+++ LH MV
Sbjct: 174 RCLLIL-AVLHIP-VALIWLNLEHILIFLHQDPMV 206
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 215 RGLLRHPGTSSLLSDCKCLPILSA-CAH 295
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 456 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 331
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -2
Query: 534 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 355
++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +D
Sbjct: 392 DDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVD 451
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -3
Query: 605 RYREVHQTRRT--RSPLPTTKVVSPW 534
RY H ++++ SP PT K V PW
Sbjct: 1301 RYIRFHNSKQSSKHSPSPTLKSVGPW 1326
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 623 RYPQRFRYREVHQTRRTRSPLPTTKVVSPWKRSSVWLMRQRSTET-RMTSKRRPSR 459
R P R +YRE H RR + T + + + + ++RS + R T + P R
Sbjct: 320 RDPDRTKYREYHSERRKQH--RTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDR 373
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,848,018
Number of Sequences: 5004
Number of extensions: 53070
Number of successful extensions: 237
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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