Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_L05
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        33   1.1  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     33   1.1  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     30   10.0 

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 778 SXXPPPKPPXPPXTXXXPKPXXXXXXXPLQXPP 876
           S  PPP PP PP     P P       PL  PP
Sbjct: 131 SPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPP 163


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 778 SXXPPPKPPXPPXTXXXPKPXXXXXXXPLQXPP 876
           S  PPP PP PP     P P       PL  PP
Sbjct: 676 SPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPP 708



 Score = 25.8 bits (54), Expect(2) = 6.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 787 PPPKPPXPPXTXXXPK 834
           PPP PP PP     PK
Sbjct: 222 PPPPPPPPPAPASEPK 237



 Score = 23.4 bits (48), Expect(2) = 6.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 724 PTXXXSXTLXEXQXXXTXSXXPPPKPPXPP 813
           P+   +  L   Q     +  PPP PP PP
Sbjct: 200 PSTVNAEPLGLIQSGPHQAAPPPPPPPPPP 229


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 790  PPKPPXPPXTXXXPKPXXXXXXXPLQXPP 876
            PP PP PP     P P       PL+ PP
Sbjct: 955  PPPPPPPPPHPPLPPPPLPPPPLPLRLPP 983


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,398,343
Number of Sequences: 237096
Number of extensions: 1346044
Number of successful extensions: 9108
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7930
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)