Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_K24
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   212   5e-55
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   212   5e-55
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   210   2e-54
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   205   5e-53
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    49   8e-06

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  212 bits (517), Expect = 5e-55
 Identities = 97/132 (73%), Positives = 110/132 (83%)
 Frame = -2

Query: 495 QRKVVKGEHGKRVRKIRNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTXE 316
           Q+K++KG  G R RKIR  VHFRRP T + PR PKYPRK +P RNRMDAYNIIK+P T E
Sbjct: 138 QKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 197

Query: 315 AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTLIRPDGKKKAYVRLARDY 136
           AAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI V KVN LIRPDG+KKAYVRLARDY
Sbjct: 198 AAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDY 257

Query: 135 DALDVAXXIGII 100
           DALD+A  IGII
Sbjct: 258 DALDIANKIGII 269


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  212 bits (517), Expect = 5e-55
 Identities = 97/132 (73%), Positives = 110/132 (83%)
 Frame = -2

Query: 495 QRKVVKGEHGKRVRKIRNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTXE 316
           Q+K++KG  G R RKIR  VHFRRP T + PR PKYPRK +P RNRMDAYNIIK+P T E
Sbjct: 146 QKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 205

Query: 315 AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTLIRPDGKKKAYVRLARDY 136
           AAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI V KVN LIRPDG+KKAYVRLARDY
Sbjct: 206 AAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDY 265

Query: 135 DALDVAXXIGII 100
           DALD+A  IGII
Sbjct: 266 DALDIANKIGII 277


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  210 bits (513), Expect = 2e-54
 Identities = 97/132 (73%), Positives = 109/132 (82%)
 Frame = -2

Query: 495 QRKVVKGEHGKRVRKIRNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTXE 316
           Q+K++KG  G R RKIR  VHFRRP T + PR PKYPRK +P RNRMDAYNIIK+P T E
Sbjct: 146 QKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 205

Query: 315 AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTLIRPDGKKKAYVRLARDY 136
           AAMKKIEDNNTLVF+ H  ANK H++AAV+KLYDI V KVN LIRPDG+KKAYVRLARDY
Sbjct: 206 AAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDY 265

Query: 135 DALDVAXXIGII 100
           DALD+A  IGII
Sbjct: 266 DALDIANKIGII 277


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  205 bits (501), Expect = 5e-53
 Identities = 96/132 (72%), Positives = 109/132 (82%)
 Frame = -2

Query: 495 QRKVVKGEHGKRVRKIRNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTXE 316
           Q+K++K   G R RKIR  VHFRRP T + PR PKYPRK +P RNRMDAYNIIK+P T E
Sbjct: 139 QKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 197

Query: 315 AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTLIRPDGKKKAYVRLARDY 136
           AAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI V KVN LIRPDG+KKAYVRLARDY
Sbjct: 198 AAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDY 257

Query: 135 DALDVAXXIGII 100
           DALD+A  IGII
Sbjct: 258 DALDIANKIGII 269


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 48.8 bits (111), Expect = 8e-06
 Identities = 30/102 (29%), Positives = 48/102 (47%)
 Frame = -1

Query: 391 IPKEVSA*EKSHGCLQHH*IPXHV*SSNEED*R*QHLGXYCSHKCKQAPYQGCSQETX*Y 212
           +P+E+ A ++ HG +QHH +P      +EED   QH G   +   +Q P    S +   +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222

Query: 211 KCW*SQHTHQA*W*EESVXXXXXXXXRIGRCXXNWHHINCSI 86
           +    +  H A W EE +        R G C  + HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,027,286
Number of Sequences: 53049
Number of extensions: 410803
Number of successful extensions: 978
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)