Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_K17
(845 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 34 0.75
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 34 0.75
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 34 0.75
AK096003-1|BAC04669.1| 620|Homo sapiens protein ( Homo sapiens ... 33 1.7
AJ316534-1|CAC48387.1| 1231|Homo sapiens serine/threonine protei... 33 1.7
AF390018-1|AAK91995.1| 1243|Homo sapiens putative protein kinase... 33 1.7
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 4.0
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 4.0
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 6.9
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 6.9
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 6.9
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 712 IXPPXPAXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 551
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 712 IXPPXPAXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 551
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 178 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 712 IXPPXPAXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 551
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>AK096003-1|BAC04669.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ38684 fis, clone KIDNE2000801. ).
Length = 620
Score = 32.7 bits (71), Expect = 1.7
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = -2
Query: 760 GTPXSXXIIXXV-SPLCIXPPXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEF 584
GTP S I + SP C P P +S SSNP H PT+ L S P P
Sbjct: 275 GTPISPGPIFPITSPPCHPSPSPFSPISSQVSSNPSPH-PTSSPLPFSSSTPEFPVPLSQ 333
Query: 583 APGLKPPLSSEAPSAYLTPSSLGMXKGGFAPLFS-SE**ITSFAPY*SSFHAYSAPPLQL 407
P P +S P+ T S + + F P S S T+ AP S A+S + +
Sbjct: 334 CPWSSLPTTS-PPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTV 392
Query: 406 TPS 398
S
Sbjct: 393 AQS 395
>AJ316534-1|CAC48387.1| 1231|Homo sapiens serine/threonine protein
kinase protein.
Length = 1231
Score = 32.7 bits (71), Expect = 1.7
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = -2
Query: 760 GTPXSXXIIXXV-SPLCIXPPXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEF 584
GTP S I + SP C P P +S SSNP H PT+ L S P P
Sbjct: 808 GTPISPGPIFPITSPPCHPSPSPFSPISSQVSSNPSPH-PTSSPLPFSSSTPEFPVPLSQ 866
Query: 583 APGLKPPLSSEAPSAYLTPSSLGMXKGGFAPLFS-SE**ITSFAPY*SSFHAYSAPPLQL 407
P P +S P+ T S + + F P S S T+ AP S A+S + +
Sbjct: 867 CPWSSLPTTS-PPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTV 925
Query: 406 TPS 398
S
Sbjct: 926 AQS 928
>AF390018-1|AAK91995.1| 1243|Homo sapiens putative protein kinase WNK4
protein.
Length = 1243
Score = 32.7 bits (71), Expect = 1.7
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = -2
Query: 760 GTPXSXXIIXXV-SPLCIXPPXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEF 584
GTP S I + SP C P P +S SSNP H PT+ L S P P
Sbjct: 820 GTPISPGPIFPITSPPCHPSPSPFSPISSQVSSNPSPH-PTSSPLPFSSSTPEFPVPLSQ 878
Query: 583 APGLKPPLSSEAPSAYLTPSSLGMXKGGFAPLFS-SE**ITSFAPY*SSFHAYSAPPLQL 407
P P +S P+ T S + + F P S S T+ AP S A+S + +
Sbjct: 879 CPWSSLPTTS-PPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTV 937
Query: 406 TPS 398
S
Sbjct: 938 AQS 940
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.5 bits (68), Expect = 4.0
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = -2
Query: 706 PPXPAXSXTSTRS--SNPXFHTPTTPDLTSISINPLTP---Y*KEFAPGLKPPLSSEAPS 542
PP + RS S+P P +P S S +PLTP + F P P ++P
Sbjct: 1810 PPPESCCALPPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTP-RFQSPD 1868
Query: 541 AYLTPSSLGMXKGGFAPL 488
Y P S + FAPL
Sbjct: 1869 PYSRPPSRPQSRDPFAPL 1886
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 4.0
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = -2
Query: 706 PPXPAXSXTSTRS--SNPXFHTPTTPDLTSISINPLTP---Y*KEFAPGLKPPLSSEAPS 542
PP + RS S+P P +P S S +PLTP + F P P ++P
Sbjct: 2115 PPPESCCALPPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTP-RFQSPD 2173
Query: 541 AYLTPSSLGMXKGGFAPL 488
Y P S + FAPL
Sbjct: 2174 PYSRPPSRPQSRDPFAPL 2191
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 703 PXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 539
P PA S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 538 YLTP 527
TP
Sbjct: 325 TATP 328
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 703 PXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 539
P PA S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 538 YLTP 527
TP
Sbjct: 325 TATP 328
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 703 PXPAXSXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 539
P PA S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 538 YLTP 527
TP
Sbjct: 329 TATP 332
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,007,143
Number of Sequences: 237096
Number of extensions: 2172346
Number of successful extensions: 5349
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5339
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -