Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_K10
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   1.5  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    24   1.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    24   1.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   7.8  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 ILVVRYPGEQHPGHTP*IQCY 360
           ++V+ +PG+   G+TP + C+
Sbjct: 344 VIVLNHPGQISNGYTPVLDCH 364


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 ILVVRYPGEQHPGHTP*IQCY 360
           ++V+ +PG+   G+TP + C+
Sbjct: 55  VIVLNHPGQISNGYTPVLDCH 75


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 ILVVRYPGEQHPGHTP*IQCY 360
           ++V+ +PG+   G+TP + C+
Sbjct: 344 VIVLNHPGQISNGYTPVLDCH 364


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 234 GEYEELGVRWKLRVESQQDLNRQVVKSD 151
           GEYEEL  R   ++ S   L  Q VK D
Sbjct: 752 GEYEELRERAYTKILSNGTLLLQHVKED 779


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 234 GEYEELGVRWKLRVESQQDLNRQVVKSD 151
           GEYEEL  R   ++ S   L  Q VK D
Sbjct: 748 GEYEELRERAYTKILSNGTLLLQHVKED 775


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 387 AQHRTASVNTHHGTCKTKYHSQ 452
           AQ +  +V  ++    TKYH Q
Sbjct: 707 AQQQVQAVRNYYANLYTKYHGQ 728


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 797 HQXSPPSGXXPNHAPL 750
           H  +PPSG   + APL
Sbjct: 511 HHVAPPSGHHASSAPL 526


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 164 WSKVTTPASGYPSWTLR*QHRVRKG 90
           W K  TP +  P+W +    RVR G
Sbjct: 343 WIK-GTPQNNVPNWVMGNHDRVRVG 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,330
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)