Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_K09
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    36   6e-04
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       29   0.037
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    29   0.049
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    27   0.15 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   7.4  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -3

Query: 210 DKEDGGDVMDLEDDENLENNSHEDNTIQSQNEEEENK--GDNIEDEKPNDEKQNEPQAN 40
           +K++G    D   ++N +N + +++  Q+ N + +NK  G+     K ND KQN  + N
Sbjct: 453 NKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQN 511



 Score = 32.7 bits (71), Expect = 0.004
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 174 DDENLENNSHEDNTIQSQNEEEENKGDNIEDEKPNDEKQNEPQAN 40
           D++N +N +  +    +QN  ++N G+   D + ND KQN  + N
Sbjct: 433 DNQNADNQNANNQNADNQNANKQN-GNRQNDNRQNDNKQNGNRQN 476



 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -3

Query: 171 DENLENNSHEDNTIQSQNEEEENKGDNIEDEKPNDEKQNEPQAN 40
           ++N  N + ++    +QN   +N  DN    K N  +QN+ + N
Sbjct: 424 NQNAGNQNADNQNADNQNANNQN-ADNQNANKQNGNRQNDNRQN 466


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 0.037
 Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
 Frame = -3

Query: 390 NVDDGTVTIDE-NDED--KAEDIKLDLEAMNAEQLREELKKCDYKSKGLRSQIISRLSEL 220
           N + GT+   E NDE+  +  D K D+E     + R   K       G R +  +R    
Sbjct: 49  NSNSGTINESEFNDENYWQCNDKKTDIEETGRGKGRGHGKG------GSRGRGGNRGRTG 102

Query: 219 SKTDKEDGGDVMDLEDDE--NLEN-NSHEDNTI--QSQNEEEE---NKGDNIEDEKPNDE 64
                +DG D  D ED++  N +N N     T   +  N+EEE    K   I  E PNDE
Sbjct: 103 FNNKNKDGDDNNDYEDNDYGNQDNRNDRRKKTFAAREDNDEEEAQKPKEQYIPPELPNDE 162

Query: 63  K 61
           K
Sbjct: 163 K 163



 Score = 25.8 bits (54), Expect = 0.45
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 159 ENNSHEDNTIQSQNEEEENKGDNIEDEKPNDEKQ 58
           +NN +EDN   +Q+   + +       + NDE++
Sbjct: 112 DNNDYEDNDYGNQDNRNDRRKKTFAAREDNDEEE 145


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 0.049
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 198 GGDVMDLEDDENLENNSHEDNTIQSQNEEEENKGDNIEDEKPNDEKQNEPQAN 40
           G +V +L  + +  NN+  DN IQ+ N + +N   N   +  N++K N    N
Sbjct: 402 GANVKELIRNTHCVNNNQNDN-IQNTNNQNDNNQKN-NKKNANNQKNNNQNDN 452


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -3

Query: 198 GGDVMDLEDDENLENNSHEDNTIQSQNEEE---ENKGDNIEDEKPNDEKQNEPQANS 37
           G +V DL  +    N  ++DN   + N  +    +K DN  + + ND+  +  ++N+
Sbjct: 402 GANVNDLIRNSRCANFDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNN 458


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
 Frame = -3

Query: 264 SKGLRSQIISRLSELSKTDKEDGGDVMDLEDDENLE--NNSHEDNTIQSQNEEEENKGDN 91
           SK   S I+ R S  S               D N E   N+H  N    +  + E + DN
Sbjct: 25  SKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESDN 84

Query: 90  IEDEKPNDEKQ 58
              ++ ND+K+
Sbjct: 85  --SKEVNDKKE 93



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/67 (17%), Positives = 32/67 (47%)
 Frame = -3

Query: 276 CDYKSKGLRSQIISRLSELSKTDKEDGGDVMDLEDDENLENNSHEDNTIQSQNEEEENKG 97
           C+  ++ L    I   +     DK++   ++D   ++  E  + E + +  + EE++ + 
Sbjct: 68  CNQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQKRRK 127

Query: 96  DNIEDEK 76
            +++D K
Sbjct: 128 KSLDDVK 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,898
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)