Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_K03
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ... 118 1e-27
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 29 0.58
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 29 0.76
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 26 5.4
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 25 9.4
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 25 9.4
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 25 9.4
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 25 9.4
>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 118 bits (284), Expect = 1e-27
Identities = 74/213 (34%), Positives = 100/213 (46%)
Frame = -2
Query: 769 QXXDGTTDIXRTRHMSGNPTAEQRDAFTRVLKGQIMIGSAYSRKALRGNVLDSFARHALW 590
Q DGTTD+ RT H G P+ +R T LKG I + + K G ++D AR LW
Sbjct: 401 QYKDGTTDVTRTWHF-GEPSEFERQTATLALKGHIALANIVFPKGTTGYMIDVLARQYLW 459
Query: 589 EXXXXXXXXXXXXXXXXLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRH 410
+ LNVHE P G+ R + L G + SNEPGFY+ G +G R
Sbjct: 460 KYGLDYLHGTGHGVGSFLNVHELPVGIGSREVFNSAPLQAGMVTSNEPGFYEDGHFGYRV 519
Query: 409 EDLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVN 230
E+ + I V N + GR LG LTL P+ ++ ID +L+ E+ Y+N
Sbjct: 520 ENCVYITEV----------NTENRFAGRTYLGLKDLTLAPHCQKLIDPSLLSPEEVKYLN 569
Query: 229 AYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 131
YH V TLSP+L + +WL PI
Sbjct: 570 EYHSEVYTTLSPMLS----VSAKKWLSKHTSPI 598
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 29.5 bits (63), Expect = 0.58
Identities = 24/112 (21%), Positives = 52/112 (46%)
Frame = -2
Query: 472 VGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTLV 293
+ QI N K+ + G+ ++E + +DKG D K ++G Y L + L +
Sbjct: 84 LAQINDNGSKALKLYQKGVT---ILERLLIDKGEDADLKKKIQGAYCSIAELFMTDLCMQ 140
Query: 292 PNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCI 137
P+ E + E+ T + ++A + L TL+ + + +++ + +C+
Sbjct: 141 PDAEE--NCELYTKLALQ-IDATNAEALQTLASMRISQQKIEEAKDALSKCL 189
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 29.1 bits (62), Expect = 0.76
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 301 TLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWL 152
TL+ Q +D +L E ++ ++L L+P E+ LK LEWL
Sbjct: 68 TLLGEQSVQVDRVLLNRTENEKIDLECVQILRLLAPFFTEKNALKVLEWL 117
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 469 GQILSNEPGFYKVGEYGIRHEDLI 398
G + + EPG Y E GIR ED +
Sbjct: 408 GNVFTVEPGIYIPDEIGIRIEDAV 431
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 433 VGEYGIRHEDLIEIVAVDKGSDHPKAKNL-RGDYDGRGVLGFSTLTLV 293
VG+ + +DL+EI + G P L GDY RG T+TL+
Sbjct: 49 VGDIHGQFDDLLEIFRI--GGPCPYTNYLFLGDYVDRGYYSIETITLL 94
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 416 NSVFPDFVEARFVAQYLSNVQSRIVGVRTPRDTGRTLVHVEVV 544
N FP AR AQ+++N S+ + V T D R L+ VV
Sbjct: 650 NMHFPQSTNARSEAQFIANTDSQYL-VPTSGDPLRGLIQDHVV 691
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 485 SWTERWTD---IEQRTWLLQSRGIRNSPRRSNRDCGC 384
S+ E+ T+ IE W+L + G+ N R+N GC
Sbjct: 60 SYAEKETEVQAIEVTKWILSNGGVWNGIDRANETPGC 96
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 506 VASVPRRSWTERWTDIEQRTW 444
V+ +R+WT W I R W
Sbjct: 204 VSQQQQRAWTRAWNAIRNRAW 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,960,637
Number of Sequences: 5004
Number of extensions: 58315
Number of successful extensions: 163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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