Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_K01
         (1090 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage f...    33   1.8  
X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.               33   1.8  
BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.        33   1.8  
AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and polyadenyl...    33   1.8  
S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   31   7.4  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   31   9.7  
K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary ...    31   9.7  

>X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage
           factor I 68 kDa subunit protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -2

Query: 663 GXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSP 538
           G +P     GP GP     PPP G++       PP  G   P
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP 274


>X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -2

Query: 663 GXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSP 538
           G +P     GP GP     PPP G++       PP  G   P
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP 274


>BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.
          Length = 588

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -2

Query: 663 GXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSP 538
           G +P     GP GP     PPP G++       PP  G   P
Sbjct: 270 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP 311


>AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and
           polyadenylation specific factor 6, 68 kD subunit variant
           protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -2

Query: 663 GXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSP 538
           G +P     GP GP     PPP G++       PP  G   P
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPP 274


>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 31.1 bits (67), Expect = 7.4
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 666 GGXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSPXXGGXXP 517
           GG  P+    GP  P   + PPP+G    +   SPP      P  GG  P
Sbjct: 112 GGNKPQ----GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQP 157



 Score = 30.7 bits (66), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 666 GGXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSPXXGGXXP 517
           GG  P+    GP  P   + PPP+G    +   SPP      P  GG  P
Sbjct: 174 GGNKPQ----GPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP 219


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 30.7 bits (66), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 666 GGXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSPXXGGXXP 517
           GG  P+    GP  P   + PPP+G    +   SPP      P  GG  P
Sbjct: 43  GGNKPQ----GPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP 88


>K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary
           proline-rich protein 1 gene, segment 1. ).
          Length = 173

 Score = 30.7 bits (66), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 666 GGXSPKXXXXGPKGPXNGETPPPRGKIWGKKXVSPPRXGXXSPXXGGXXP 517
           GG  P+    GP  P   + PPP+G    +   SPP      P  GG  P
Sbjct: 47  GGNKPQ----GPPPPGKPQGPPPQGGKRSRSPRSPPGKPQGPPPQGGNQP 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,270,419
Number of Sequences: 237096
Number of extensions: 1968659
Number of successful extensions: 5466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5114
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14981781346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)