Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_J09
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   3.8  

>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 301 GWGNXXGGXPGXXGGFXXXXPXXGXLXDPPXPP 203
           G+G   GG  G  GGF    P  G    PP  P
Sbjct: 488 GFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGP 520


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = +3

Query: 195 PXXGGXGGSXXXPXXGXXXXNPPXXPGXPPXXFPHPXXXGS 317
           P  GG GG    P  G     PP   G PP   P P   G+
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPT-GFPPVGAPPPGAAGA 464


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,006,862
Number of Sequences: 27780
Number of extensions: 106460
Number of successful extensions: 138
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)