Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_J05
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 36 0.22
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 33 1.5
D63808-1|BAA23631.1| 76|Homo sapiens DRPLA protein. 33 1.5
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 33 1.5
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 33 1.5
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 33 1.5
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 32 2.0
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 32 2.0
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 32 2.0
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 32 2.0
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 4.7
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 31 6.2
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 31 6.2
BC030525-1|AAH30525.1| 55|Homo sapiens Unknown (protein for MG... 31 6.2
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 31 6.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 6.2
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 6.2
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 6.2
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 6.2
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 6.2
AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens ... 30 8.2
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 35.5 bits (78), Expect = 0.22
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD-GRVTKESIEN 428
++ +++KDS R RK +AP E +LRSRG+ S GKA+ R T +
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARV 59
Query: 427 EXXXXXXXXXXXRGDNQAGAQGE---GAKRTRHETSQRTQNDQS-EEKGNFDLESTGRSD 260
E R + + ++ E K+T+ E R Q+ + L G SD
Sbjct: 60 EEASTPKVNKQGRSEEISESESEETNAPKKTKTEELPRPQSPSDLDSLDGRSLNDDGSSD 119
Query: 259 AHDEVQE 239
D Q+
Sbjct: 120 PRDIDQD 126
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD 458
++ +++KDS R RK +AP E +LRSRG+ S GKA+
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAE 48
>D63808-1|BAA23631.1| 76|Homo sapiens DRPLA protein.
Length = 76
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD 458
++ +++KDS R RK +AP E +LRSRG+ S GKA+
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAE 48
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD 458
++ +++KDS R RK +AP E +LRSRG+ S GKA+
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAE 48
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD 458
++ +++KDS R RK +AP E +LRSRG+ S GKA+
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAE 48
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 604 VRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKAD 458
++ +++KDS R RK +AP E +LRSRG+ S GKA+
Sbjct: 1 MKTRQNKDSMSMRSGRKKEAPGPRE-ELRSRGRASPGGVSTSSSDGKAE 48
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -1
Query: 646 SHKGLDGTQVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRG 467
+H+ LD ++ FPK AK + +P R P + ER+++ + + +PATPV +
Sbjct: 59 THERLDLKKIQFPKKEAKTPTKNGLPGSR-----PGSPEREVKRKVEVVSPATPVPSETA 113
Query: 466 KA 461
A
Sbjct: 114 PA 115
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -1
Query: 646 SHKGLDGTQVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRG 467
+H+ LD ++ FPK AK + +P R P + ER+++ + + +PATPV +
Sbjct: 59 THERLDLKKIQFPKKEAKTPTKNGLPGSR-----PGSPEREVKRKVEVVSPATPVPSETA 113
Query: 466 KA 461
A
Sbjct: 114 PA 115
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -1
Query: 646 SHKGLDGTQVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRG 467
+H+ LD ++ FPK AK + +P R P + ER+++ + + +PATPV +
Sbjct: 55 THERLDLKKIQFPKKEAKTPTKNGLPGSR-----PGSPEREVKRKVEVVSPATPVPSETA 109
Query: 466 KA 461
A
Sbjct: 110 PA 111
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -1
Query: 646 SHKGLDGTQVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRG 467
+H+ LD ++ FPK AK + +P R P + ER+++ + + +PATPV +
Sbjct: 46 THERLDLKKIQFPKKEAKTPTKNGLPGSR-----PGSPEREVKRKVEVVSPATPVPSETA 100
Query: 466 KA 461
A
Sbjct: 101 PA 102
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 607 KVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRV-TKESIE 431
++R +S++ R+RR+ + + + RSRG+RS ++P K KA+ R +KE E
Sbjct: 67 RLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSP-GSKSKKAENRSRSKEKAE 125
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 30.7 bits (66), Expect = 6.2
Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Frame = -1
Query: 607 KVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIEN 428
K +KS SP PR R K D ER S + +T + + DG KE +E
Sbjct: 397 KTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDG---KEKLEK 453
Query: 427 EXXXXXXXXXXXRGDNQAGAQ--GEGAKRTRHETSQRTQNDQSEEK 296
D+ + + A RT Q N Q E+
Sbjct: 454 NSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEE 499
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 30.7 bits (66), Expect = 6.2
Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Frame = -1
Query: 607 KVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIEN 428
K +KS SP PR R K D ER S + +T + + DG KE +E
Sbjct: 397 KTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDG---KEKLEK 453
Query: 427 EXXXXXXXXXXXRGDNQAGAQ--GEGAKRTRHETSQRTQNDQSEEK 296
D+ + + A RT Q N Q E+
Sbjct: 454 NSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEE 499
>BC030525-1|AAH30525.1| 55|Homo sapiens Unknown (protein for
MGC:40524) protein.
Length = 55
Score = 30.7 bits (66), Expect = 6.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -2
Query: 366 REKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLE 226
R +G+ + R+ ++K K KKK+ +++ + R R R+RR++
Sbjct: 8 RRRGRGKKKKRKRKKKKKKKKKKKKKKKKKKKKKRRRRRRGRRRRMQ 54
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 30.7 bits (66), Expect = 6.2
Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Frame = -1
Query: 607 KVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIEN 428
K +KS SP PR R K D ER S + +T + + DG KE +E
Sbjct: 397 KTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDG---KEKLEK 453
Query: 427 EXXXXXXXXXXXRGDNQAGAQ--GEGAKRTRHETSQRTQNDQSEEK 296
D+ + + A RT Q N Q E+
Sbjct: 454 NSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEE 499
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSR----GKRSTPATPVVEKR 470
R +S+ SPV R+R + P R+ RSR +RS TP V +R
Sbjct: 1909 RRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSR----GKRSTPATPVVEKR 470
R +S+ SPV R+R + P R+ RSR +RS TP V +R
Sbjct: 941 RRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 988
Score = 30.7 bits (66), Expect = 6.2
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIENEX 422
R +S+ SPV R+R + P A R+ RSR TP P R ++ + + S
Sbjct: 1036 RRSRSRTSPVTRRRSRSRTPPAIRRRSRSR----TPLLPRKRSRSRSPLAIRRRSRSRTP 1091
Query: 421 XXXXXXXXXXRGD---NQAGAQGEGAKRTRHETSQRTQNDQSEEKGNFDLESTGRS 263
R + A G + R+R T T+N L S+ S
Sbjct: 1092 RTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMS 1147
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSR----GKRSTPATPVVEKR 470
R +S+ SPV R+R + P R+ RSR +RS TP V +R
Sbjct: 1909 RRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
Score = 30.7 bits (66), Expect = 6.2
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIENEX 422
R +S+ SPV R+R + P A R+ RSR TP P R ++ + + S
Sbjct: 2004 RRSRSRTSPVTRRRSRSRTPPAIRRRSRSR----TPLLPRKRSRSRSPLAIRRRSRSRTP 2059
Query: 421 XXXXXXXXXXRGD---NQAGAQGEGAKRTRHETSQRTQNDQSEEKGNFDLESTGRS 263
R + A G + R+R T T+N L S+ S
Sbjct: 2060 RTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMS 2115
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSR----GKRSTPATPVVEKR 470
R +S+ SPV R+R + P R+ RSR +RS TP V +R
Sbjct: 432 RRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 479
Score = 30.7 bits (66), Expect = 6.2
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIENEX 422
R +S+ SPV R+R + P A R+ RSR TP P R ++ + + S
Sbjct: 527 RRSRSRTSPVTRRRSRSRTPPAIRRRSRSR----TPLLPRKRSRSRSPLAIRRRSRSRTP 582
Query: 421 XXXXXXXXXXRGD---NQAGAQGEGAKRTRHETSQRTQNDQSEEKGNFDLESTGRS 263
R + A G + R+R T T+N L S+ S
Sbjct: 583 RTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMS 638
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSR----GKRSTPATPVVEKR 470
R +S+ SPV R+R + P R+ RSR +RS TP V +R
Sbjct: 1957 RRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 2004
Score = 30.7 bits (66), Expect = 6.2
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 601 RAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESIENEX 422
R +S+ SPV R+R + P A R+ RSR TP P R ++ + + S
Sbjct: 2052 RRSRSRTSPVTRRRSRSRTPPAIRRRSRSR----TPLLPRKRSRSRSPLAIRRRSRSRTP 2107
Query: 421 XXXXXXXXXXRGD---NQAGAQGEGAKRTRHETSQRTQNDQSEEKGNFDLESTGRS 263
R + A G + R+R T T+N L S+ S
Sbjct: 2108 RTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMS 2163
>AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ43705 fis, clone TESOP2001818. ).
Length = 321
Score = 30.3 bits (65), Expect = 8.2
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -1
Query: 592 KSKDSPVPRKRRKVDA---PEANERQLRSRGKRSTPATPVVEKRGKADGRVTKESI 434
K SP+P + A +A ++L SRG+ S AT V E+RG + R ++S+
Sbjct: 118 KISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSL 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,279,556
Number of Sequences: 237096
Number of extensions: 1755455
Number of successful extensions: 6555
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6518
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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