Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_I24
(847 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 35 0.43
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 35 0.43
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 35 0.43
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 35 0.43
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 35 0.43
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 34 0.75
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 34 0.75
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 34 0.75
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 34 0.75
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 34 0.75
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 32 2.3
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 32 2.3
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 32 2.3
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 32 2.3
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 3.0
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 6.9
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 6.9
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 6.9
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 6.9
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 6.9
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 30 9.2
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + P P P PPP G P P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 332
Query: 781 PXPXXLXXXXPPXXXXPPXXXP 846
P L PP PP P
Sbjct: 333 P---PLTLAPPPHLPGPPPGAP 351
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + P P P PPP G P P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 332
Query: 781 PXPXXLXXXXPPXXXXPPXXXP 846
P L PP PP P
Sbjct: 333 P---PLTLAPPPHLPGPPPGAP 351
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + P P P PPP G P P
Sbjct: 200 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 259
Query: 781 PXPXXLXXXXPPXXXXPPXXXP 846
P L PP PP P
Sbjct: 260 P---PLTLAPPPHLPGPPPGAP 278
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + P P P PPP G P P
Sbjct: 310 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 369
Query: 781 PXPXXLXXXXPPXXXXPPXXXP 846
P L PP PP P
Sbjct: 370 P---PLTLAPPPHLPGPPPGAP 388
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + P P P PPP G P P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 332
Query: 781 PXPXXLXXXXPPXXXXPPXXXP 846
P L PP PP P
Sbjct: 333 P---PLTLAPPPHLPGPPPGAP 351
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 33.9 bits (74), Expect = 0.75
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P P P P P P PPP G P P +
Sbjct: 359 PPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 418
Query: 781 PXP 789
P
Sbjct: 419 LVP 421
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 33.9 bits (74), Expect = 0.75
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P P P P P P PPP G P P +
Sbjct: 359 PPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 418
Query: 781 PXP 789
P
Sbjct: 419 LVP 421
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 33.9 bits (74), Expect = 0.75
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P P P P P P PPP G P P +
Sbjct: 359 PPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 418
Query: 781 PXP 789
P
Sbjct: 419 LVP 421
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.75
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P P P P P P PPP G P P +
Sbjct: 371 PPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 430
Query: 781 PXP 789
P
Sbjct: 431 LVP 433
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 33.9 bits (74), Expect = 0.75
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P P P P P P PPP G P P +
Sbjct: 359 PPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 418
Query: 781 PXP 789
P
Sbjct: 419 LVP 421
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/85 (27%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXX---PXXXPX 771
PP P P L P P P P PPP+ P P
Sbjct: 70 PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP-PPPQPALPSPPPLVAPT 128
Query: 772 XXSPXPXXLXXXXPPXXXXPPXXXP 846
SP P L PP PP P
Sbjct: 129 PSSPPPPPLPPPPPPAMPSPPPPPP 153
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/78 (24%), Positives = 20/78 (25%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + F P P PPP P P S
Sbjct: 453 PPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLS 512
Query: 781 PXPXXLXXXXPPXXXXPP 834
PP PP
Sbjct: 513 QPTRGAPPPPPPPPPGPP 530
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/78 (24%), Positives = 20/78 (25%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
PP P P P P + F P P PPP P P S
Sbjct: 324 PPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLS 383
Query: 781 PXPXXLXXXXPPXXXXPP 834
PP PP
Sbjct: 384 QPTRGAPPPPPPPPPGPP 401
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/85 (27%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXX---PXXXPX 771
PP P P L P P P P PPP+ P P
Sbjct: 615 PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP-PPPQPALPSPPPLVAPT 673
Query: 772 XXSPXPXXLXXXXPPXXXXPPXXXP 846
SP P L PP PP P
Sbjct: 674 PSSPPPPPLPPPPPPAMPSPPPPPP 698
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 3/85 (3%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXX---AXXFXPXXPXPXPXXFPPPRXGXXPXXXPX 771
PP P P P S P A P P P P PP G P P
Sbjct: 294 PPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPP 353
Query: 772 XXSPXPXXLXXXXPPXXXXPPXXXP 846
P PP PP P
Sbjct: 354 PLPNSPAPPNPGGPPPAPPPPGLAP 378
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
P P P P P L P P P P P PPPR G
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPP---PRLPPPAPPGIPPPRPGMMRPPLVPPLG 516
Query: 781 PXPXXLXXXXP 813
P P L P
Sbjct: 517 PAPPGLFPPAP 527
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
P P P P P L P P P P P PPPR G
Sbjct: 219 PGPPPGRPPGPPPGPPPGLPPGPPPRGPP---PRLPPPAPPGIPPPRPGMMRPPLVPPLG 275
Query: 781 PXPXXLXXXXP 813
P P L P
Sbjct: 276 PAPPGLFPPAP 286
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
P P P P P L P P P P P PPPR G
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPP---PRLPPPAPPGIPPPRPGMMRPPLVPPLG 516
Query: 781 PXPXXLXXXXP 813
P P L P
Sbjct: 517 PAPPGLFPPAP 527
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
P P P P P L P P P P P PPPR G
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPP---PRLPPPAPPGIPPPRPGMMRPPLVPPLG 516
Query: 781 PXPXXLXXXXP 813
P P L P
Sbjct: 517 PAPPGLFPPAP 527
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +1
Query: 601 PPRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXS 780
P P P P P L P P P P P PPPR G
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPP---PRLPPPAPPGIPPPRPGMMRPPLVPPLG 516
Query: 781 PXPXXLXXXXP 813
P P L P
Sbjct: 517 PAPPGLFPPAP 527
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +1
Query: 604 PRPXXXXPXPXXXPXXXLXSXXPXXXAXXFXPXXPXPXPXXFPPPRXGXXPXXXPXXXSP 783
P P P P + S A F P P P PPP+ P P +
Sbjct: 36 PGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPPSPGAS 95
Query: 784 XPXXLXXXXPP--XXXXPPXXXP 846
P PP PP P
Sbjct: 96 YPPPQPPPPPPLYQRVSPPQPPP 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,299,668
Number of Sequences: 237096
Number of extensions: 792977
Number of successful extensions: 2604
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2381
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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