Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_I22
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 2e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 144 1e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 3e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 2e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 51 2e-07
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 34 0.021
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 34 0.021
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.11
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.14
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.33
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.44
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 0.58
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.58
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.77
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.77
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 1.3
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 28 1.3
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 1.8
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.4
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 27 2.4
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 27 3.1
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 27 3.1
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 26 5.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.4
SPCC613.05c |rpl35||60S ribosomal protein L35|Schizosaccharomyce... 26 7.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 7.2
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 25 9.5
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 9.5
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 9.5
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 146 bits (355), Expect = 2e-36
Identities = 67/114 (58%), Positives = 88/114 (77%)
Frame = -1
Query: 570 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDE 391
K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDP 554
Query: 390 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKM 229
LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+
Sbjct: 555 NLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKI 608
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 676 GIPTRRRVACLKLRSPXDIDANGILNVSAIEKSTXQGEQ 560
GIP R ++ D+DANGILNVSA+EK T + ++
Sbjct: 461 GIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 144 bits (349), Expect = 1e-35
Identities = 66/114 (57%), Positives = 88/114 (77%)
Frame = -1
Query: 570 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDE 391
K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDP 554
Query: 390 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKM 229
LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+
Sbjct: 555 NLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKI 608
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 676 GIPTRRRVACLKLRSPXDIDANGILNVSAIEKSTXQGEQ 560
GIP R ++ D+DANGILNVSA+EK T + ++
Sbjct: 461 GIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (264), Expect = 3e-25
Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Frame = -1
Query: 591 LSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSM 412
+ +S K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSL 577
Query: 411 KSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNPII 238
K +DE+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI
Sbjct: 578 KGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPIT 637
Query: 237 TKM 229
K+
Sbjct: 638 QKL 640
Score = 31.9 bits (69), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 665 PAPRGVPQIEVTF 627
PAPRGVPQIEVTF
Sbjct: 493 PAPRGVPQIEVTF 505
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 676 GIPTRRRVACLKLRSPXDIDANGILNVSAIEKS 578
GIP R ++ ++DANG+L VSA++KS
Sbjct: 490 GIPPAPR-GVPQIEVTFEVDANGVLTVSAVDKS 521
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = -1
Query: 558 ITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKE 379
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 378 KISDSDKQTI---LDKCNDTIKWLDSN 307
K+ DK I L +C ++ D+N
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTN 590
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -3
Query: 676 GIPTRRRVACLKLRSPXDIDANGILNVSAIEKST 575
GIP R +L + ++DANGIL V+A+EK+T
Sbjct: 466 GIPPMPRGQA-ELEATFELDANGILKVTAVEKTT 498
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 50.8 bits (116), Expect = 2e-07
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = -1
Query: 570 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTME-- 397
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 396 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 259
+KL ++ + + I D K ++ E+ + K E++
Sbjct: 597 KDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQ 642
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = -3
Query: 625 DIDANGILNVSAIEKST 575
D+DA+GI+NVSA +K+T
Sbjct: 520 DVDADGIINVSARDKAT 536
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 692 NXELTRDSHPAPRGVPQIEVTF 627
N +LT + PAP+G PQIEV+F
Sbjct: 499 NFQLTGIA-PAPKGQPQIEVSF 519
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 34.3 bits (75), Expect = 0.021
Identities = 32/136 (23%), Positives = 54/136 (39%)
Frame = -1
Query: 597 FPLSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCF 418
F + P K T+ + + E+ + E EK + +A+ A
Sbjct: 205 FSSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSA 264
Query: 417 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPII 238
+ +E EK KEK D D++ DT+ D NQ+ D+ E K+ + E + P
Sbjct: 265 QNSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTT 315
Query: 237 TKMXPGCRRSPRRYAG 190
+ + P + P R G
Sbjct: 316 SPILPPKNQEPIRMGG 331
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 34.3 bits (75), Expect = 0.021
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -1
Query: 558 ITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMED--EKL 385
++++ + RL E +E+ + D ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPF 601
Query: 384 KEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 241
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 602 TNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 343
EE++ +NEA+K NE + I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 342 K 340
K
Sbjct: 79 K 79
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 31.5 bits (68), Expect = 0.14
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = -1
Query: 594 PLSRSPPXKENKITITNDKGRLSKEEIERMVNE-AEKYRNEDDRQKETIQAKNALESYCF 418
P+ + P K K + ++ +E E +EK ++ + + KNA ++
Sbjct: 72 PVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALAD 131
Query: 417 SMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 265
M DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 132 DMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 31.5 bits (68), Expect = 0.14
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 364
K R +E I + EAE+ + E +RQ+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 363 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 265
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.33
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 361
+GR + + N+ E + DD+Q + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 360 KQTILDKCNDTIK 322
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.44
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = -1
Query: 528 SKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 349
+KEE+E +NE + E + Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 348 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 259
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.58
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = -1
Query: 606 SSTFPLSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALES 427
SST P S PP T ++D L + ++E ++N +DR K+ + L
Sbjct: 7 SSTTPAS--PPTSPPNTTSSDDFAVLKEPKVEAILNSELGLAILNDRIKDYLLTCKELAG 64
Query: 426 YCFSMKSTMEDEKLK--EKISDSDKQTILDK 340
+ F +S +E+E K +K++ S +T K
Sbjct: 65 F-FKKRSILEEESGKNLQKLAKSYLETFQSK 94
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.5 bits (63), Expect = 0.58
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 384 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKEL-EGICNPIITKMXPG--C 217
+EKI +++TI D K + + ++ EEY KQKEL E + P ++ P
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELA 486
Query: 216 RRSPRRYAGL 187
R ++Y GL
Sbjct: 487 RERFKKYRGL 496
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.77
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -1
Query: 552 ITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKI 373
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 372 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEGICN 247
D++++ D +K+ L + EY +QK + E I N
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQKRKADAEAIAN 534
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDD 469
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -1
Query: 570 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDE 391
K+ K T D SKEE+E +V E E D Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 390 KLKEKISD 367
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -1
Query: 576 PXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTME 397
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 396 DEKLKEKISDSDKQTILDKCNDTIK 322
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 567 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDRQKETIQAKNAL------ESYCFSMK 409
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 408 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 289
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDRQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 346
+++E+M +K ++E+ + ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 345 DKCNDTIKWLDSNQLADKEEYEHKQK 268
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -1
Query: 579 PPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTM 400
PP + + G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 399 EDEKLKEKISD 367
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 477 EDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 298
+ R++ + A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 297 DK 292
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = -1
Query: 525 KEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 346
+++I + + + E RNE+ R+++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 345 D 343
D
Sbjct: 451 D 451
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -1
Query: 504 VNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 325
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 324 KWLDSNQLADKEEYEHKQKELEGICNPI 241
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -1
Query: 567 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTME 397
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 546 NDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 370
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 369 DSDKQT 352
+D+ T
Sbjct: 695 -TDRLT 699
Score = 25.8 bits (54), Expect = 7.2
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = -1
Query: 534 RLSKEEIERMVNEAEKYRNEDDRQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 358
+L++E +ER+ E ++YR + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 357 QTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 265
+T + + K L +N+L+ E +H +KE
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKE 1041
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 531 LSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 361
++K + + +AEK R ED+R+K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 558 ITITND-KGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLK 382
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 381 EKISDSDKQTILDKC 337
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPCC613.05c |rpl35||60S ribosomal protein L35|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 558 ITITNDKGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEK 388
+T+ N+ RL+ E + +KY D RQK+T + AL Y S K+ + +K
Sbjct: 57 LTVINESNRLAAREAYKN----KKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKK 109
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 522 EEIERMVNEAEKYRNEDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 352
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 507 MVNEAEKYRNEDDRQKETIQAKNALESYCFSMKST 403
M+++ RN+ ++Q TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 615 PTVSSTFPLSRSPPXKENKITITNDKGRLSKE 520
P VSST P++ +PP + K+T + + SK+
Sbjct: 592 PAVSST-PVTSAPPVSQTKVTKVSVPKKTSKK 622
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 319
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 477 EDDRQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 316
E D+ ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 540 KGRLSKEEIERMVNEAEKYRNEDDRQKETIQAKNALE 430
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,717,396
Number of Sequences: 5004
Number of extensions: 50005
Number of successful extensions: 231
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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