Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_H23
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0543 + 10427321-10428315,10428440-10429154                       29   3.5  
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748...    29   4.6  

>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
 Frame = +1

Query: 460 PXXLPXYXXXPXPRXXXPXPXPPAXPXXXXXDPDXXXXTPXPXXXSXPG-AXXXQPTXXT 636
           P  +P     P P    P P P   P      P     TP P     PG A    P   +
Sbjct: 27  PPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPP----GPGPAAAPSPHSPS 82

Query: 637 XXXXXXXSPXXLXXXPPPP 693
                  +P      PPPP
Sbjct: 83  PSNAPWVAPAADIPPPPPP 101


>08_01_0774 +
           7482311-7482919,7484012-7484077,7484211-7484384,
           7484473-7484603,7484726-7484802,7484981-7485064,
           7487885-7488066,7488189-7488266,7489813-7489945,
           7491610-7491670,7491861-7491942,7492143-7492271,
           7492510-7492653,7493102-7493204,7493382-7493513,
           7494127-7494485,7495149-7495229,7495384-7495450,
           7495636-7495706,7496087-7496178,7496365-7496458,
           7497692-7497789,7498206-7498341,7498599-7498618,
           7498781-7498876,7498973-7499060,7499171-7499288,
           7499738-7499759,7500203-7500326,7500625-7500702,
           7500837-7500955,7501816-7501869,7502260-7502362,
           7503133-7503261,7503345-7503453,7503788-7503819
          Length = 1424

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/53 (30%), Positives = 16/53 (30%)
 Frame = +1

Query: 469 LPXYXXXPXPRXXXPXPXPPAXPXXXXXDPDXXXXTPXPXXXSXPGAXXXQPT 627
           LP     P P    P P P   P      P      P P   S P A    PT
Sbjct: 52  LPPELMPPSPPKASPTPPPQPQPHPQLQPPPPPAPLPPPSRRSAPRAQGVDPT 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,278,324
Number of Sequences: 37544
Number of extensions: 187838
Number of successful extensions: 570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)