Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_H15
         (823 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     34   0.54 
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    31   5.0  
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance...    31   5.0  
AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated prot...    31   5.0  
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.              31   5.0  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   5.0  
AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated prot...    31   5.0  
AL132655-8|CAM28316.1|  625|Homo sapiens GNAS complex locus prot...    31   6.7  

>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 34.3 bits (75), Expect = 0.54
 Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
 Frame = +3

Query: 513  AGLXAGXXGXRXXAQSGPXRXTPXXPXPPVPRPXXXXTXPXP-IXTRXLPLXPXPXXRPX 689
            AG  AG    R  A     R  P  P PP   P      P P +  R  PL P P  RP 
Sbjct: 934  AGPGAGLPPPRAPALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPH 993

Query: 690  XGP 698
              P
Sbjct: 994  PPP 996



 Score = 31.5 bits (68), Expect = 3.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 611  PXXGNPPLXHXHPXPPPXXXPXXPP 685
            P    PPL   HP PPP   P  PP
Sbjct: 982  PPLPPPPLPRPHPPPPPPLPPLLPP 1006


>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
            protein protein.
          Length = 3703

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = +3

Query: 564  PXRXTPXXPXPPVPRPXXXXTXPXPIXTRXLPLXPXPXXRPXXGP 698
            P    P  P PP P P      P P  T  +P    P   P   P
Sbjct: 2034 PQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAP 2078


>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
            binding protein protein.
          Length = 2783

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = +3

Query: 564  PXRXTPXXPXPPVPRPXXXXTXPXPIXTRXLPLXPXPXXRPXXGP 698
            P    P  P PP P P      P P  T  +P    P   P   P
Sbjct: 1120 PQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAP 1164


>AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated protein
           5-11 protein.
          Length = 221

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 668 GXKGEGXGXNGXGXGXXXXGPGXRGXRXGRCXPXXSGLCXXAXAXPP 528
           G +G G G  G G G    G G  G   G C    SG C       P
Sbjct: 29  GGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCCVPVCCCKP 75


>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
          Length = 2553

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = +3

Query: 564  PXRXTPXXPXPPVPRPXXXXTXPXPIXTRXLPLXPXPXXRPXXGP 698
            P    P  P PP P P      P P  T  +P    P   P   P
Sbjct: 884  PQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAP 928


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 596 PCXPAPXXGNPPLXHXHPXPPP 661
           P  PAP    PPL H  P PPP
Sbjct: 234 PAHPAPVHQPPPLPHRPPPPPP 255


>AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 668 GXKGEGXGXNGXGXGXXXXGPGXRGXRXGRCXPXXSGLCXXAXAXPP 528
           G +G G G  G G G    G G  G   G C    SG C       P
Sbjct: 29  GGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCCVPVCCCKP 75


>AL132655-8|CAM28316.1|  625|Homo sapiens GNAS complex locus
           protein.
          Length = 625

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +3

Query: 576 TPXXPXPP--VPRPXXXXTXPXPIXTRXLPLXPXPXXRP 686
           TP  P PP  +P P    T P PI T   PL P P   P
Sbjct: 367 TPGQPLPPQPIPTPGRPLT-PQPIPTPGRPLTPQPIQMP 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,940,186
Number of Sequences: 237096
Number of extensions: 1139286
Number of successful extensions: 8242
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6724
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)