Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_H07
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 7e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.019
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.019
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.059
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.32
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.73
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 3.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 5.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 9.0
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.1 bits (87), Expect = 7e-04
Identities = 25/82 (30%), Positives = 27/82 (32%)
Frame = +1
Query: 523 PXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKT 702
P AP P PP P PS PP+ P P P P P P K+
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 703 PPPXXSXXXXXXCPXXXPPXXP 768
PP S P PP P
Sbjct: 184 PPSAPS------LPSAVPPMPP 199
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 571 PXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXP-XXPXXPXKTPPPXXS 720
P P PS LPP P P PP P P P P K PPP S
Sbjct: 161 PSKAPPIPSSLPPPAQ----PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 590 PPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXPXXXPXXP 769
P P PPP S P P PP P P P S P A P P P
Sbjct: 145 PRPSIPPPSPA-SAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS-LPSAVPPMPPKVP 202
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 496 PXXLXXPXXPXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPP 636
P P P P P P P PS +PP PP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +2
Query: 569 PXXXXPXPPPXXP--PPXXXXSXXPXPPLGPPPXPXXPXPP 685
P PPP P P S P PP P P PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +2
Query: 590 PPPXXPPPXXXXSXXPXPPLG---PPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXPXXXP 760
PPP PP P PP G PPP P P + P S P A P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 34.3 bits (75), Expect = 0.019
Identities = 24/82 (29%), Positives = 27/82 (32%)
Frame = +2
Query: 524 PXXXPXXXXRXXXXPPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKX 703
P P PP P PP PP S P P+G P P P PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP-SAPPSLPMGAPAAP--PLPPSAPIAP 457
Query: 704 PXPSXXXSXXPXAXPXXXPXXP 769
P P+ + P P P P
Sbjct: 458 PLPAGMPAAPP--LPPAAPAPP 477
Score = 29.5 bits (63), Expect = 0.55
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +2
Query: 593 PPXXPPPXXXXSXXPXPPLG---PPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXPXXXPX 763
PP PP S PPLG P P PP P PS S P + P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPS-APPSLPMGAPA 445
Query: 764 XP 769
P
Sbjct: 446 AP 447
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 514 PXXPXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXP 693
P P AP P P +P LPP+ PP P P P P P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPP-LPPSAPIA--PPLPAGMPAAPPLPPAAPAPP 477
Query: 694 XKTPP 708
P
Sbjct: 478 PAPAP 482
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +2
Query: 569 PXXXXPXPPPXXPPPXXXXSXXPXPPLGP-PPXPXXPXPPXXXK-KXPXPSXXXSXXPXA 742
P P PPP PP S P P P P P K P PS S A
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALA 305
Query: 743 XPXXXPXXP 769
P P
Sbjct: 306 ANKKRPPPP 314
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 568 PPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPP 708
PP S LPP P P PP P P P PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSAPPSLPPSAPP 437
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 571 PXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPP 711
P P PS PP P P P PP P P P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPP--PSNGTVSSPPNSPPRP 274
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 569 PXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXP 736
P P P PP P PP+ PP P P P P P S P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 566 PPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXP 712
PP P PPP P P P GPP P P P P P
Sbjct: 1699 PPQMSAPTPPPP-PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +1
Query: 601 LPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPPXXSXXXXXXCPXXXPPXXP 768
+ P P P P P P P PPP + P PP P
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +2
Query: 596 PXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXP 748
P PP S P P P P P P P+ S P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.019
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = -2
Query: 768 GXXGXXXGXAXGXXXXXXXGXGXFXXXXGGX--GXXGXGGGPRGGXGXXXXXXXGGGXXG 595
G G G G G F GG G G GGGP G G G G G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 594 GGXG 583
GG G
Sbjct: 263 GGPG 266
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -2
Query: 711 GXGXFXXXXGGXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXGXXXXG 568
G G GG G G GGGP G G G G GGG G G
Sbjct: 212 GFGGEGHHHGGHG--GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 28.7 bits (61), Expect = 0.97
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -3
Query: 683 GXXGXXGXXGGPGXGXGGXXXXXWVGGRXEGXXGXXXGGXXXXXXXXGXGAXXGXXG 513
G G G GGP G GG GG G G G G G G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Score = 28.7 bits (61), Expect = 0.97
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 681 GXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXGXXXXG 568
G G G GGP G G G G GGG G G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 711 GXGXFXXXXGGXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXG 583
G G GG G GGG RGG G GG GG G
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 33.9 bits (74), Expect = 0.026
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 684 GGXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXGXXXXGGXXXXRXXXXGXXXG 523
G G G GG RGG G GGG GG G G R G G
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.059
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 747 GXAXGXXXXXXXGXGXFXXXXGGXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXGXXXXG 568
G + G G G F GG G GG RGG G G G GG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGA-RGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 684 GGXGXXGXGGGPRGGXGXXXXXXXGGGXXGGGXGXXXXGGXXXXRXXXXGXXXG 523
G G G G RGG G GGG G G GG R G G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -2
Query: 675 GXXGXGGGPRGGXGXXXXXXXG-GGXXGGGXGXXXXGGXXXXRXXXXGXXXG 523
G G GG RGG G G GG GG G GG R G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARG-GGRGGARGGRGGRGGARGG 56
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.059
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 566 PPXXXXPXPPPXXPPPXXXXSXXPXPPLGPP 658
PP PPP PPP + P PP PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = +2
Query: 566 PPXXXXPXPPP---XXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXP 736
PP P P P PPP P PP PPP PP P S S
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 737 XAXPXXXP 760
P P
Sbjct: 794 APAPQAEP 801
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 593 PPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXPXXXP 760
PP PP + P P PPP P PP P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP----PPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.73
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +1
Query: 589 SPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPPXXSXXXXXXCPXXXPPXXP 768
SP PP P P P PP P P P PPP + P PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP---PPPGVAGAG----PPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = +1
Query: 583 PXSPSXLPPTXXXXXXP-PXPXP---GPPXXPXXPXXPXX-PXKTPPP 711
P P+ + PT P P P P GPP P P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 568 PPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPP 711
PP P P PP P G P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/48 (27%), Positives = 13/48 (27%)
Frame = +1
Query: 514 PXXPXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPGPP 657
P P P PP P PP P P P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.10
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +2
Query: 524 PXXXPXXXXRXXXXPPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKX 703
P P P P PPP PP S PP+ PPP P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG-VPPV-PPPSTAPPVPTPSAGLP 1227
Query: 704 PXPSXXXSXXPXAXP 748
P P P P
Sbjct: 1228 PVPVPTAKAPPVPAP 1242
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Frame = +2
Query: 584 PXPPPXXPPPXXXXSXXPXPPLGPP---PXPXXPXPPXXXKKXPXPSXXXSXXPXAXPXX 754
P PP P P P P PP P P P P P + P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 755 XPXXP 769
P P
Sbjct: 1120 APPVP 1124
Score = 30.7 bits (66), Expect = 0.24
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 566 PPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAX 745
P P P P PP S P P P P P P PS P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 746 PXXXPXXP 769
P P
Sbjct: 1186 AGVPPVPP 1193
Score = 29.9 bits (64), Expect = 0.42
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 566 PPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAX 745
PP P P P P P G PP P PP P PS P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP----PPSEAPPVPKPS--VGVPPVPP 1212
Query: 746 PXXXPXXP 769
P P P
Sbjct: 1213 PSTAPPVP 1220
Score = 28.7 bits (61), Expect = 0.97
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +1
Query: 514 PXXPXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPG--PPXXPXXPXXPX 687
P P P PP P + + PP PP P P PP P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADA--PPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Query: 688 XPXKTPPPXXSXXXXXXCPXXXPP 759
P P P S P PP
Sbjct: 1062 APPPVPAP-SSEIPSIPAPSGAPP 1084
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +2
Query: 524 PXXXPXXXXRXXXXPPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKX 703
P P P P P P PP S P P P P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 704 PXPS 715
P PS
Sbjct: 1153 PAPS 1156
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = +2
Query: 584 PXPPPXXPP-PXXXXSXXPXP-PLGPPPXPX----XPXPPXXXKKXPXPSXXXSXXPXAX 745
P P PP P + P P P G PP P P P P P + P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 746 PXXXPXXP 769
P P P
Sbjct: 1155 PSGAPPVP 1162
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +2
Query: 524 PXXXPXXXXRXXXXPPXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKX 703
P P P P PPP PP P L P P P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT----PSAGLPPVPVPTAKAPPVPAPSS 1244
Query: 704 PXPS 715
PS
Sbjct: 1245 EAPS 1248
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +2
Query: 569 PXXXXPXPPPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPSXXXSXXPXAXP 748
P P P P P P P + PP P P P P + P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP------PVPKPSVAAPPVPVP 1136
Query: 749 XXXPXXP 769
P P
Sbjct: 1137 SGAPPVP 1143
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/79 (24%), Positives = 21/79 (26%)
Frame = +1
Query: 532 APXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPP 711
A P PP P S +P + P P P P P P P P
Sbjct: 1029 ADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP--SSEIPSIPAPSGAPPVP 1086
Query: 712 XXSXXXXXXCPXXXPPXXP 768
S P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVP 1105
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = +1
Query: 523 PXXAPXPXXXXXXXXPPXXXPXS--PSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPX 696
P AP P PP P S P P PP P P P P
Sbjct: 1155 PSGAP-PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Query: 697 KTPPP 711
T PP
Sbjct: 1214 STAPP 1218
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 523 PXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXP--GPPXXPXXPXXPXXP 693
P A P PP P + +PP PP P P G P P P P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAA--GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 25.4 bits (53), Expect = 9.0
Identities = 23/91 (25%), Positives = 24/91 (26%), Gaps = 6/91 (6%)
Frame = +1
Query: 514 PXXPXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXP-GPPXXP----XXPX 678
P P P P P S +P PP P P G P P P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 679 XPXXPXKTPP-PXXSXXXXXXCPXXXPPXXP 768
P PP P S P P P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.32
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 593 PPXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKK 700
PP PPP P P PP P P PP KK
Sbjct: 5 PPGNPPPPP-----PPPGFEPPSQPPPPPPPGYVKK 35
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 590 PPPXXPPPXXXXSXXPXPPLGPPP 661
PPP PPP P PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP--PPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 596 PXXPPPXXXXSXXPXPPLGPPPXPXXPXPPXXXKKXPXPS 715
P PP P P PPP P P + P PS
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPS 260
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 571 PXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPP 711
P P +PP P P PG P P P P T PP
Sbjct: 515 PNLNMSQPPMVPPGMALPPGMPAPFPG---YPAVPAMPGIPGATAPP 558
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/63 (23%), Positives = 17/63 (26%)
Frame = +1
Query: 523 PXXAPXPXXXXXXXXPPXXXPXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKT 702
P P P PP P + P P PP P P P +
Sbjct: 140 PLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRL 199
Query: 703 PPP 711
P P
Sbjct: 200 PHP 202
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 583 PXSPSXLPPTXXXXXXPPXPXPGPPXXPXXPXXPXXPXKTPPP 711
P P P P P PG P P P P P PP
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEP-VPEEPLPGEPP 140
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +2
Query: 566 PPXXXXPXPPPXXP-PPXXXXSXXPXPPL-GPPPXPXXPXP 682
PP P P P P P PL G PP P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +2
Query: 590 PPPXXPPPXXXXSXXPXPPLGP--PPXPXXPXPPXXXKKXPXPS 715
P P P P PP+ P P P P PP PS
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPS 618
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 660 GGGPRGGXGXXXXXXXGGGXXGGGXG 583
GGG RGG G GG G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,308,380
Number of Sequences: 5004
Number of extensions: 17904
Number of successful extensions: 325
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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