Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_G14
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine r... 33 0.87
U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine r... 33 0.87
M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha ... 33 0.87
L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine recep... 33 0.87
BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid... 33 0.87
BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid... 33 0.87
BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid... 33 0.87
BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor, n... 33 0.87
AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic acet... 33 0.87
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 31 3.5
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 31 3.5
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 31 3.5
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 31 3.5
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 31 3.5
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 31 3.5
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 31 3.5
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 31 3.5
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 31 3.5
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 31 3.5
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 31 3.5
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 31 3.5
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 31 3.5
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 31 3.5
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 31 4.7
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 31 4.7
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 31 4.7
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 31 4.7
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 31 4.7
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 31 4.7
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 31 4.7
Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine r... 31 6.1
X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25... 31 6.1
U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine r... 31 6.1
BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor, n... 31 6.1
BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor, n... 31 6.1
AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor, n... 31 6.1
AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein. 31 6.1
AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic acet... 31 6.1
>Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.87
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
+W + + ++ + +P D+Q C+ KFGS ++ ++D +++ +++
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDV 207
>U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.87
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
+W + + ++ + +P D+Q C+ KFGS ++ ++D +++ +++
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDV 207
>M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha 5
subunit protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.87
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
+W + + ++ + +P D+Q C+ KFGS ++ ++D +++ +++
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDV 207
>L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine receptor
alpha-5-subunit protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.87
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 650
R IS MQL+++P D C KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.87
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 650
R IS MQL+++P D C KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.87
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 650
R IS MQL+++P D C KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5, precursor protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.87
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 650
R IS MQL+++P D C KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor,
nicotinic, alpha 5 protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.87
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
+W + + ++ + +P D+Q C+ KFGS ++ ++D +++ +++
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDV 207
>AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-5subunit protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.87
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
+W + + ++ + +P D+Q C+ KFGS ++ ++D +++ +++
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDV 207
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 146 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 189
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 117 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 160
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 190
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 145 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 188
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 146 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 189
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 190
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 191
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 190
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
+WI + + + +P D Q CT KFGS ++ ++D V+
Sbjct: 142 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL 185
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 108 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 155
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
W + +M + +P D Q C+ KFGS ++ +D ++ +N+
Sbjct: 143 WTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENV 190
>Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25 to
477) protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein.
Length = 504
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
>AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 2 protein.
Length = 502
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + +++ ++P D Q CT KF S ++ E+D V+
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,231,775
Number of Sequences: 237096
Number of extensions: 1467061
Number of successful extensions: 5037
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5029
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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