Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_G14
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 31 0.012
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 29 0.049
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 28 0.085
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 28 0.085
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.26
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.26
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.26
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.26
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.34
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.34
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.34
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.34
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.34
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.34
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.34
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.34
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.45
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.60
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.60
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 1.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 25 1.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 1.0
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.7
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.003
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 727 NWPNDMQTCTFKFGSRMHNSDEMDFVIDXK 638
+WP D C FGS +H+ +E++ +D K
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.012
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -3
Query: 775 WIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
W+ + ++ + +P D QTC KFGS N D++ +
Sbjct: 141 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.1 bits (62), Expect = 0.049
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 739 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNIQYVRVRSV 608
+ ++ +P D QTC KFGS ++ F +D ++I +R ++V
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDG----FQVDLRHIDEIRGKNV 190
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 28.3 bits (60), Expect = 0.085
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGS 683
R I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 28.3 bits (60), Expect = 0.085
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 778 SWIKRXDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 656
SW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 147 SWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.26
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 739 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 647
M + +P D Q C KFGS ++ +++D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.6 bits (56), Expect = 0.26
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = -3
Query: 742 SMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 650
+M+ +++P+D Q C+ S H + ++ F+
Sbjct: 133 AMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.26
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVID 644
+P+D Q C + S H +DEM F D
Sbjct: 170 YPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 742 SMQLDNWPNDMQTCTFKFGSRMHNSDEMD 656
S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMDFVI 647
+P D Q C KFGS ++ +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 739 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 656
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMD 656
+P D QTC KFGS ++ ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.60
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEM 659
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.4 bits (53), Expect = 0.60
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 721 PNDMQTCTFKFGSRMHNSDEMDFVIDXKNIQYVR 620
P D++ FK+G H + + +D KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 766 RXDISTPISMQLDNWPNDMQTCTFKFGS 683
R I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 314 SLISNLSNTCDLTPLPEWSCEQSAWWGACGRVL 216
SL +N + LTP P W+ ++ GACG +
Sbjct: 98 SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 739 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 656
+ ++ +P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 739 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXKNI 632
++L+ +P D+Q C F S HN +M D + I
Sbjct: 144 LRLEKFPFDVQECPLIFESWTHNVLDMVLYWDQEPI 179
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 724 WPNDMQTCTFKFGSRMHNSDEMD 656
+P D Q C KFGS ++ ++D
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLD 177
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 593 CPVRCRARTVARWKLAWQCS 534
C VRC A + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 442 LAARH*TTTSCGFSVH 395
LAAR T++SC + H
Sbjct: 331 LAAREITSSSCSYMAH 346
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,715
Number of Sequences: 438
Number of extensions: 2685
Number of successful extensions: 36
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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