Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_G03
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless prot...    31   2.4  
X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless prot...    31   2.4  
AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-P...    31   2.4  
J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein ( D.me...    30   4.1  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   9.5  

>X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless protein
           protein.
          Length = 2510

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 742 SHNXGGXALMHQATLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSSDAVL 593
           S   G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 327 SGETGSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 377


>X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless protein
           protein.
          Length = 2554

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 742 SHNXGGXALMHQATLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSSDAVL 593
           S   G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 371 SGETGSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-PA
           protein.
          Length = 2554

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 742 SHNXGGXALMHQATLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSSDAVL 593
           S   G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 371 SGETGSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein (
           D.melanogaster sevenlessprotein gene, complete cds. ).
          Length = 2554

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 742 SHNXGGXALMHQATLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSSDAVL 593
           S   G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 371 SGETGSSAWFNLADYDCDEYYMCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -2

Query: 645 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSP 493
           PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G SP
Sbjct: 413 PTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGPSP 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,193,929
Number of Sequences: 53049
Number of extensions: 692096
Number of successful extensions: 2053
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)