Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_F18
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.6  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   4.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   6.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/17 (47%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -1

Query: 280 WF-NEDWNIQNKYNDFL 233
           W+ N D+N++NK N F+
Sbjct: 208 WYLNHDYNLENKLNYFI 224


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 488 RVVSVLGYACPDITYSP 438
           R+  +LGY  PD T++P
Sbjct: 231 RLYDLLGYVMPDRTFAP 247


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 402 HAWHDFSFCPNKENV 358
           H   DF +CP+ +NV
Sbjct: 6   HNGRDFEYCPDLDNV 20


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  NVLPDFIAVYCTNKAKH 83
           N+LP  +A Y  ++A+H
Sbjct: 759 NILPPHVAAYFLSRARH 775


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 19/71 (26%), Positives = 26/71 (36%)
 Frame = -2

Query: 633 CSTXXTGTWSHSIRHSGAAGQADYVAAFRGGDPLPRVPSNPQG*GRSRQSCVRARIRLSR 454
           C+T        S   + A   A    A +   P P   S+PQ  G S  +   AR   S 
Sbjct: 30  CTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSP-TGSSPQHSGSSASTSPAARTTSSM 88

Query: 453 YHVQPKSLSHH 421
           Y     + +HH
Sbjct: 89  YPYVSAAAAHH 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,921
Number of Sequences: 438
Number of extensions: 4327
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)