Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_F16
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0286 + 16400695-16401369,16401473-16401658,16402115-164025...    29   4.1  
08_02_0903 + 22438406-22438614,22439640-22440366,22440494-224406...    28   7.2  

>09_04_0286 +
           16400695-16401369,16401473-16401658,16402115-16402575,
           16402678-16402836,16402914-16403265,16403360-16403653
          Length = 708

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 626 TALSSAVQSQXPWARWKLAWQC 561
           T   S V     WARW L WQC
Sbjct: 537 TCRHSFVLQMVEWARWVLTWQC 558


>08_02_0903 +
           22438406-22438614,22439640-22440366,22440494-22440679,
           22441310-22441770,22441869-22442027,22442098-22442449,
           22442563-22442842,22443330-22443661
          Length = 901

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 614 SAVQSQXPWARWKLAWQC 561
           S V     WARW L WQC
Sbjct: 628 SFVLQMVEWARWVLTWQC 645


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,833,059
Number of Sequences: 37544
Number of extensions: 226229
Number of successful extensions: 648
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)