Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_F08
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0063 + 6481568-6481570,6481922-6482470 35 0.064
02_01_0302 - 2021221-2023305 33 0.19
11_07_0002 - 27171791-27172222 32 0.59
09_02_0279 + 6702517-6702948 32 0.59
11_01_0347 + 2601170-2602019,2602245-2603353 31 0.79
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 29 4.2
11_01_0763 + 6402901-6403971,6404581-6404826 29 4.2
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.2
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.2
01_06_0752 + 31704071-31704787 29 4.2
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 5.5
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 6.5
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 28 7.3
05_05_0106 + 22435192-22435614,22436880-22436968,22437617-224378... 28 7.3
02_01_0289 - 1937125-1937385,1937570-1937611 28 7.3
01_06_1568 - 38299113-38299790,38300165-38300254,38300368-383004... 28 7.3
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 7.3
11_06_0610 - 25449085-25453284 28 9.7
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 28 9.7
03_06_0199 + 32310272-32311432 28 9.7
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 35.1 bits (77), Expect = 0.064
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = -2
Query: 432 ATGRRCIASRPGRLVLVQRGIPGHRRHRLGGPTGCRTETADVLEPSIRLEG 280
ATGRR A+RPGRLV + + G RR GP G R A+ + R G
Sbjct: 130 ATGRRDAATRPGRLVAMAATV-GSRREERRGPAG-RPAPAEAVRTRRRRRG 178
>02_01_0302 - 2021221-2023305
Length = 694
Score = 33.5 bits (73), Expect = 0.19
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +1
Query: 187 PRSEPG*G-RGATA-VNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPP 360
P PG G +G A V++ RRRG P+ + + + + PP
Sbjct: 389 PGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPP 448
Query: 361 VSRNTPLDQNQPAGSGRDTPSTGRSNHSTAAR*SAGSAPHGLTPS 495
S TP + P GS TPS N + S S P TPS
Sbjct: 449 SSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPS 493
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 427 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 305
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 427 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 305
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>11_01_0347 + 2601170-2602019,2602245-2603353
Length = 652
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 244 RRGSPQGRPADGAFEANRRL*NVGRLGTAARRAA--QTVPPVSRNTPLDQNQPAGSGR 411
RRGS + A + L ++GR+G+A R +++PP+ N DQ+QP + +
Sbjct: 39 RRGSGELVSLAAAKRRGKALADLGRVGSADARQVFDRSLPPLGVNNGADQSQPGNNSK 96
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 143 LNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 286
+ND A H D + G+ PD QP A P+D QP PS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPS 223
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +1
Query: 202 G*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQ 348
G GRGA R RG G DGA + RRL AA R A+
Sbjct: 54 GGGRGAATHQGRRRWRGVGSGGGGDGAATSRRRLARQPAAAVAAARCAR 102
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 397 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 314
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 174 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 263
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 548 RTGVFPPPAPGSTATDRC 601
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 172 DVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
D + P EP + +A T RR GSP PA A +A
Sbjct: 135 DAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 94 HGVVSRPRA-QGF*SPPTKRLLCTLTPDV-----RSPPRSEPG*GRGATAVNTTTRRRGS 255
HG +S PR+ +P +R +TP V RSP P RG A + + RG
Sbjct: 50 HGALSAPRSGDEEITPWWRRSPSAVTPPVYPHVERSP---SPPIARGWPADDDERQERGE 106
Query: 256 PQGRPA 273
P G PA
Sbjct: 107 PSGSPA 112
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 346 QTVPPVSRNTPLDQNQPA 399
Q P V ++TPL +PA
Sbjct: 153 QPAPHVEQSTPLPAKEPA 170
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 453 RCRGVIRATGRRCIASRPGRLVLVQRGIPGHRRHRL 346
RCR +I+A C RLV+ + I HR HRL
Sbjct: 560 RCRDLIQAISNACSLRNGERLVIAE--IRNHRIHRL 593
>05_05_0106 +
22435192-22435614,22436880-22436968,22437617-22437814,
22438475-22438679,22438749-22438916,22439095-22439262,
22439344-22439534,22440776-22440879,22441285-22441298
Length = 519
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 310 VGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAA 453
+GRLG A + VPP Q GSGR TP G S ++AA
Sbjct: 9 LGRLGGAP--SPPPVPPAVAAVASLQRGGGGSGRRTPGKGGSASASAA 54
>02_01_0289 - 1937125-1937385,1937570-1937611
Length = 100
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 139 PTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPA 273
PT LC + PD SP R P G G + RR G G A
Sbjct: 36 PTSGSLCAMLPDSCSPHR--PQLGVGCRQIGVRRRRTGGMNGSGA 78
>01_06_1568 -
38299113-38299790,38300165-38300254,38300368-38300484,
38300600-38300962
Length = 415
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 340 AAQTVPPVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAAR 456
AA+TV P+ +PL Q+Q GR+ +TAAR
Sbjct: 6 AARTVTPLPAASPLQQHQQRRGAWARVGNGRAASTTAAR 44
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/99 (25%), Positives = 37/99 (37%)
Frame = +1
Query: 187 PRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPPVS 366
P G RG + + +R Q D E R R + R +++
Sbjct: 144 PSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRS----P 199
Query: 367 RNTPLDQNQPAGSGRDTPSTGRSNHSTAAR*SAGSAPHG 483
R +P D P GS RDT S S + + + S P+G
Sbjct: 200 RGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNG 238
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 355 PPVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAAR*SAGSAPHGLTPS 495
PP P + + PA P G+S + A S P G TPS
Sbjct: 529 PPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPS 575
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 131 RAHPLNDSSALLHPTSDP---LRG-QNPDEVGGLPRSTLQPDGAAHPKDAQ 271
RA P+ D + P+S+ L G Q P VG + R ++ D AA P DA+
Sbjct: 147 RASPVIDLNEACEPSSEEMEELHGYQEPVRVGRVMRYPMEGDFAAGPSDAK 197
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 81 SHIPRAPLLRGDLVGGSALYPKKKKK 4
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,559,028
Number of Sequences: 37544
Number of extensions: 474399
Number of successful extensions: 1775
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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