Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_F08
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 36 0.22
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 36 0.22
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.22
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.22
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.22
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 34 0.67
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.88
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.88
AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance calci... 31 4.7
AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance calci... 31 4.7
AL954342-3|CAH72739.1| 731|Homo sapiens potassium intermediate/... 31 4.7
AL606500-5|CAH71911.1| 731|Homo sapiens potassium intermediate/... 31 4.7
AL390204-3|CAH71151.1| 731|Homo sapiens potassium intermediate/... 31 4.7
AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein. 31 4.7
AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance calci... 31 4.7
AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated potas... 31 4.7
U89293-1|AAB72039.1| 936|Homo sapiens MSH4 protein. 31 6.2
BC033030-1|AAH33030.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 6.2
AY268350-1|AAP03427.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 6.2
AL445464-2|CAH71812.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 6.2
AL357314-6|CAI22394.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 6.2
AF104243-1|AAD17920.1| 936|Homo sapiens meiosis-specific MutS h... 31 6.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 7.0
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 7.8
BC042202-1|AAH42202.1| 384|Homo sapiens AKNA protein protein. 30 8.2
AY703044-1|AAU34191.1| 1358|Homo sapiens AKNA transcript E protein. 30 8.2
AY703043-1|AAU34190.1| 1439|Homo sapiens AKNA transcript D protein. 30 8.2
AY703040-1|AAU34187.1| 1364|Homo sapiens AKNA transcript B1 prot... 30 8.2
AY703039-1|AAU34186.1| 1320|Homo sapiens AKNA transcript A protein. 30 8.2
AL356796-6|CAI16862.2| 1439|Homo sapiens AT-hook transcription f... 30 8.2
AL356796-5|CAM23638.1| 1358|Homo sapiens AT-hook transcription f... 30 8.2
AL356796-4|CAI16861.1| 899|Homo sapiens AT-hook transcription f... 30 8.2
AK131082-1|BAC85132.1| 1495|Homo sapiens FLJ00281 protein protein. 30 8.2
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 8.2
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 8.2
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 8.2
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 35.5 bits (78), Expect = 0.22
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 286
P DF PL DS+ L P+ DPL G GG + P AHP+ P PS
Sbjct: 1050 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1104
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 35.5 bits (78), Expect = 0.22
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 286
P DF PL DS+ L P+ DPL G GG + P AHP+ P PS
Sbjct: 986 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1040
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.67
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +2
Query: 122 KDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTL----QPDGAAHPKDAQPTEPSR 289
+DFR P +D HP + R P+ GGLP+ST Q HP+ P R
Sbjct: 601 EDFRCPPEDD---FRHPREEDWRRPPPEHFGGLPQSTSGGHPQSTSGGHPQSISGARP-R 656
Query: 290 RIEGSKTSAVS 322
G + ++S
Sbjct: 657 STSGDRPRSIS 667
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 111 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 166
>AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 111 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 166
>AL954342-3|CAH72739.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 105 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AL606500-5|CAH71911.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 105 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AL390204-3|CAH71151.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 105 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein.
Length = 736
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 110 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 165
>AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance
calcium-activated potassium channel protein.
Length = 736
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 110 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 165
>AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated
potassium channel protein.
Length = 731
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 119 PKDFRAHPLNDSSALLHPTSDPLRGQNPDE--VGGLPRSTLQ--PDGAAHPKDAQP 274
P FRA P ++S+A+LHP+S N ++ +G P ST P G + + A P
Sbjct: 105 PTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP 160
>U89293-1|AAB72039.1| 936|Homo sapiens MSH4 protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>BC033030-1|AAH33030.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>AY268350-1|AAP03427.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>AL445464-2|CAH71812.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>AL357314-6|CAI22394.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>AF104243-1|AAD17920.1| 936|Homo sapiens meiosis-specific MutS
homolog protein.
Length = 936
Score = 30.7 bits (66), Expect = 6.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 253 SPQGRPADGAFEANRR------L*NVGRLGTAARRAAQTVPPVSRNTPLDQNQPAGSGRD 414
+P RPA G++ N+R + + G ++ A T P + TPL P SG
Sbjct: 74 APNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYK 133
Query: 415 --TPSTGRSNHSTAA 453
TP G S S++A
Sbjct: 134 SWTPQVGYSASSSSA 148
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 7.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 7.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 7.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC042202-1|AAH42202.1| 384|Homo sapiens AKNA protein protein.
Length = 384
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 209 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 260
>AY703044-1|AAU34191.1| 1358|Homo sapiens AKNA transcript E protein.
Length = 1358
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1183 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1234
>AY703043-1|AAU34190.1| 1439|Homo sapiens AKNA transcript D protein.
Length = 1439
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1264 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1315
>AY703040-1|AAU34187.1| 1364|Homo sapiens AKNA transcript B1 protein.
Length = 1364
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1189 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1240
>AY703039-1|AAU34186.1| 1320|Homo sapiens AKNA transcript A protein.
Length = 1320
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1145 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1196
>AL356796-6|CAI16862.2| 1439|Homo sapiens AT-hook transcription factor
protein.
Length = 1439
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1264 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1315
>AL356796-5|CAM23638.1| 1358|Homo sapiens AT-hook transcription factor
protein.
Length = 1358
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1183 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1234
>AL356796-4|CAI16861.1| 899|Homo sapiens AT-hook transcription
factor protein.
Length = 899
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 724 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 775
>AK131082-1|BAC85132.1| 1495|Homo sapiens FLJ00281 protein protein.
Length = 1495
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 291
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1293 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1344
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,467,844
Number of Sequences: 237096
Number of extensions: 2489660
Number of successful extensions: 9450
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 7777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9384
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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