Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_F06
(834 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 151 4e-36
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 151 4e-36
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 151 4e-36
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 151 4e-36
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 151 4e-36
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 151 4e-36
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 149 2e-35
X67001-1|CAA47399.1| 452|Homo sapiens homologue of the murine ... 31 6.8
S45205-1|AAB23637.1| 452|Homo sapiens Fli-1 protein. 31 6.8
M98833-1|AAA35812.2| 452|Homo sapiens ERGB transcription factor... 31 6.8
BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. 31 6.8
BC010115-1|AAH10115.1| 452|Homo sapiens FLI1 protein protein. 31 6.8
BC001670-1|AAH01670.1| 452|Homo sapiens FLI1 protein protein. 31 6.8
AY029368-1|AAK50443.1| 452|Homo sapiens friend leukemia integra... 31 6.8
AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK125391-1|BAC86154.1| 763|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens ... 31 6.8
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 151 bits (365), Expect = 4e-36
Identities = 71/128 (55%), Positives = 91/128 (71%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRRV+ PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 149 bits (360), Expect = 2e-35
Identities = 70/128 (54%), Positives = 90/128 (70%)
Frame = -1
Query: 765 KNIXVFXVSCEAGXVYPDDVCAX*V*CLASEVR*SNSDEYGPAFQGEKEGMVTMHDILDA 586
+ + +F VSCEAG Y +C L + EK+ MVTMHD+LDA
Sbjct: 211 RRLGIFWVSCEAG-TYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDA 269
Query: 585 QWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEV 406
QW Y+NHKDE+YLRR + PLE LL +HKR+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV
Sbjct: 270 QWLYDNHKDESYLRRFVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEV 329
Query: 405 DQEIVIVT 382
+QEIV++T
Sbjct: 330 NQEIVVIT 337
Score = 101 bits (241), Expect = 4e-21
Identities = 41/56 (73%), Positives = 53/56 (94%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIK 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 238 KPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNY--NVKKE 119
K +KK QG LDK+GKP ++TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>X67001-1|CAA47399.1| 452|Homo sapiens homologue of the murine
FLI-1 gene protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>S45205-1|AAB23637.1| 452|Homo sapiens Fli-1 protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>M98833-1|AAA35812.2| 452|Homo sapiens ERGB transcription factor
protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein.
Length = 1699
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -1
Query: 297 TQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRKN 118
+++CH+G +H +KM + + + EK P G + + + +++ K + + M +
Sbjct: 1118 SESCHDGYQH-QEKMRQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRT 1176
Query: 117 RR 112
RR
Sbjct: 1177 RR 1178
>BC010115-1|AAH10115.1| 452|Homo sapiens FLI1 protein protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>BC001670-1|AAH01670.1| 452|Homo sapiens FLI1 protein protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>AY029368-1|AAK50443.1| 452|Homo sapiens friend leukemia
integration 1 transcription factor protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 232 HRKKSSYXQGKLDKYGKPNENTP----KEWLNSYVNYNVKKEPENGDGVEE 92
H K+ YG+P++ P +EW+N V NVK+E ++ +G E
Sbjct: 28 HLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRE 78
>AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens cDNA
FLJ44035 fis, clone TESTI4028612. ).
Length = 1315
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -1
Query: 297 TQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRKN 118
+++CH+G +H +KM + + + EK P G + + + +++ K + + M +
Sbjct: 879 SESCHDGYQH-QEKMRQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRT 937
Query: 117 RR 112
RR
Sbjct: 938 RR 939
>AK125391-1|BAC86154.1| 763|Homo sapiens protein ( Homo sapiens
cDNA FLJ43401 fis, clone OCBBF2010416. ).
Length = 763
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -1
Query: 297 TQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRKN 118
+++CH+G +H +KM + + + EK P G + + + +++ K + + M +
Sbjct: 623 SESCHDGYQH-QEKMRQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRT 681
Query: 117 RR 112
RR
Sbjct: 682 RR 683
>AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21924 fis, clone HEP04086. ).
Length = 724
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = -1
Query: 297 TQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRKN 118
+++CH+G +H +KM + + + EK P G + + + +++ K + + M +
Sbjct: 83 SESCHDGYQH-QEKMRQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRT 141
Query: 117 RR 112
RR
Sbjct: 142 RR 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,165,161
Number of Sequences: 237096
Number of extensions: 2153505
Number of successful extensions: 4597
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4576
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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