Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_F06
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 122 4e-28
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 30 1.8
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 4.1
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 4.1
Z75541-2|CAA99854.2| 301|Caenorhabditis elegans Hypothetical pr... 29 5.4
U80838-6|AAC71115.1| 169|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80028-10|AAN73868.2| 376|Caenorhabditis elegans Serpentine rec... 28 7.2
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 9.5
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 122 bits (293), Expect = 4e-28
Identities = 50/82 (60%), Positives = 68/82 (82%)
Frame = -1
Query: 627 EKEGMVTMHDILDAQWSYENHKDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKV 448
E E MVTMHD+LDAQ+ + KDE+Y+R +++PLE LL HKR+ +KDS +NA+CYGAK+
Sbjct: 244 ENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYGAKI 303
Query: 447 LLPGILRYEDGIEVDQEIVIVT 382
L+PGILRY+D IEV +EIVI++
Sbjct: 304 LIPGILRYDDDIEVGKEIVIMS 325
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = -2
Query: 377 KGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 210
KGEA+ +A+A M TST+AS DHGV AK KRVIMERD Y RKWGLGP AS+KK +++
Sbjct: 327 KGEAICIAIAQMNTSTIASVDHGVVAKSKRVIMERDVYGRKWGLGPVASKKKQMVK 382
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 229 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----VKKEPENGDGVEEGSRKRTASTA 62
+KK G LDK+GKPN+ TPK W YV + VKKE + EE +K++ +
Sbjct: 376 KKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQTSTKKEVKKEETPDEEEEEAPKKKSKKSK 435
Query: 61 NAEDPD 44
E D
Sbjct: 436 KQESSD 441
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = -1
Query: 300 ETQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRK 121
E T +P + ++S TEK T +T +T +++ TVT+T +
Sbjct: 90 ECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSSTTVTTTTI--S 147
Query: 120 NRRMVTVSRKAAESERQAQLTQK 52
N + VT + +++ Q T++
Sbjct: 148 NSKPVTPDKDKDSKDQRKQRTKR 170
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/86 (27%), Positives = 44/86 (51%)
Frame = -3
Query: 277 NETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV 98
NET ++ SD + + K +G ++ + +E K+++ Y N N+K EPE DG+
Sbjct: 46 NETELDDDEESDNE--KLKGLRGRGDVEMKDEESE-FEKKYMKGY-NENIKDEPEGQDGM 101
Query: 97 EEGSRKRTASTANAEDPDVSIEVKQE 20
+ + T N +DP V+ +V +
Sbjct: 102 KGIAMYST----NKDDPYVTEQVDSD 123
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = -3
Query: 274 ETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVE 95
E PEN D + H+K+ ++ + +E++ K + N K + DG E
Sbjct: 729 EDEEPENHDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDE 788
Query: 94 EGSRKRTASTANAEDPDVSIEVKQE 20
+ RKR + ++ E + E
Sbjct: 789 DEERKRKKHKKHKKEKKSKKEKRDE 813
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 181 PNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDVS 38
P E P E +S NV++ E+ D EEG+ T + ++E PDV+
Sbjct: 203 PTETEPSEETSSVPTENVEESEEDADEREEGT---TVNVNSSEVPDVA 247
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
D KP ++KSS GK G +E+ K N KK E+ + +E S
Sbjct: 69 DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
D KP ++KSS GK G +E+ K N KK E+ + +E S
Sbjct: 69 DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
D KP ++KSS GK G +E+ K N KK E+ + +E S
Sbjct: 69 DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121
>Z75541-2|CAA99854.2| 301|Caenorhabditis elegans Hypothetical
protein F52B5.2 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 552 YLRRVIKPLEGLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRY 424
Y+ R IKP E LLI + I I D + KV+ PG L Y
Sbjct: 133 YIHRDIKP-ENLLIDGETICIADFGETVLSTSDKVVKPGTLPY 174
>U80838-6|AAC71115.1| 169|Caenorhabditis elegans Hypothetical
protein F47F6.4 protein.
Length = 169
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 119 FFLNIIVDVTV*PFFWCVLIWFAIFVKF 202
F N ++ V PF W V WFA V++
Sbjct: 108 FSANFNIEFKVLPFMWTVCYWFAPLVEY 135
>U80028-10|AAN73868.2| 376|Caenorhabditis elegans Serpentine
receptor, class w protein139 protein.
Length = 376
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 147 VTSTIMLRKNRRMVTVSRKAAESERQAQL 61
VT +++ KNRR ++ S+ +AES R L
Sbjct: 246 VTQLLLVNKNRRSISSSKSSAESLRTTHL 274
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -3
Query: 187 GKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAS---TANAEDPDVS 38
GKPN TPK S + + E ENG + R+R AS N + P++S
Sbjct: 536 GKPNNGTPKRMTFSPI--ADESEEENGARIPSPPRERRASGGRPGNNDGPNLS 586
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 220 SSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGD 104
S +G D +G +N EW+ + + +KE +NG+
Sbjct: 129 SQKMKGIKDGFGADGQNKWAEWMAKFEQFKQQKEDQNGN 167
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -3
Query: 292 SVS*WNET-RTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVN 137
+V+ W +T T E+ S + R + Y +LDK+ K + N K+ +N+Y++
Sbjct: 162 AVNEWLDTLETNEDRRSPTQVQRFNTLYEIPRLDKWFKSDANPSKQKMNNYLS 214
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 631 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 515
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1237 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1275
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 631 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 515
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1903 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1941
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 631 GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 515
G GR G D + R + +R D SSSN+T+ P
Sbjct: 1908 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1946
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,124,983
Number of Sequences: 27780
Number of extensions: 354717
Number of successful extensions: 957
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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