Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_F03
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113597-1|AAM29602.1|  126|Drosophila melanogaster RH47776p pro...    31   2.1  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    30   4.8  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    30   4.8  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    30   4.8  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   6.3  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   6.3  

>AY113597-1|AAM29602.1|  126|Drosophila melanogaster RH47776p
           protein.
          Length = 126

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
 Frame = +2

Query: 236 PHHALCSHDHSGSGVRSQVLERLEMRLRSGGGGARRQ-RCTRHXTAXAXXXAAXHTARXP 412
           PHH       SG     +       R +  G   RR  RC R  T       A H+A   
Sbjct: 23  PHHRSVPWSRSGESRGDECSRYSRTRCQRTGHRFRRGGRCHRQATGHIHDQGAPHSAGPR 82

Query: 413 PVR---ATHPRXRCPPXPXRLET 472
           P+R   AT P    PP P  L+T
Sbjct: 83  PLRPALATSPTP--PPVPQLLQT 103


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230 HAPHHALCSHDHSGSGVRSQVLERLEMR 313
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230 HAPHHALCSHDHSGSGVRSQVLERLEMR 313
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230  HAPHHALCSHDHSGSGVRSQVLERLEMR 313
            H PHH    H H+G+G   Q  E+L+++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
 Frame = +1

Query: 685 PPTXLXXXXXPXXSXPKXPXPXXXXXXFX*TXXXXPHPXPXSAPXPGXPPXRXXPXVP-P 861
           PP        P    P  P P      +       P P P S P P   P    P  P P
Sbjct: 140 PPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKP 199

Query: 862 RP 867
           RP
Sbjct: 200 RP 201


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
 Frame = +1

Query: 685 PPTXLXXXXXPXXSXPKXPXPXXXXXXFX*TXXXXPHPXPXSAPXPGXPPXRXXPXVP-P 861
           PP        P    P  P P      +       P P P S P P   P    P  P P
Sbjct: 140 PPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKP 199

Query: 862 RP 867
           RP
Sbjct: 200 RP 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,900,209
Number of Sequences: 53049
Number of extensions: 355765
Number of successful extensions: 1709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)