Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_E08
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           30   1.9  
11_06_0610 - 25449085-25453284                                         30   2.5  
10_03_0023 - 7151465-7152111,7152222-7152405                           30   2.5  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   3.2  
04_03_0904 + 20717005-20718087                                         29   5.7  
03_01_0515 - 3864796-3865425                                           28   7.5  
04_04_1125 + 31085106-31085714                                         28   9.9  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +1

Query: 634 PPXXXXPXXPXLXPXTXPXXPXXXXPXXXLXXXPXXSPKXXLAPPXXSXPPXXP 795
           PP    P  P + P   P  P    P       P   P    +PP    PP  P
Sbjct: 101 PPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPP 154


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/75 (25%), Positives = 24/75 (32%)
 Frame = +1

Query: 571  PLRXXPXXXPXXLSPXXLHXRPPXXXXPXXPXLXPXTXPXXPXXXXPXXXLXXXPXXSPK 750
            P++  P   P  L P  +   PP       P       P  P    P   +   P  +P 
Sbjct: 1180 PVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPP-VKSPPPPAPV 1238

Query: 751  XXLAPPXXSXPPXXP 795
                PP  S PP  P
Sbjct: 1239 ISPPPPEKSPPPAAP 1253



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/75 (24%), Positives = 23/75 (30%)
 Frame = +1

Query: 571  PLRXXPXXXPXXLSPXXLHXRPPXXXXPXXPXLXPXTXPXXPXXXXPXXXLXXXPXXSPK 750
            P++  P   P    P  +   PP       P       P  P    P   +   P  +P 
Sbjct: 1164 PIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPP-VKSPPPPAPV 1222

Query: 751  XXLAPPXXSXPPXXP 795
                PP  S PP  P
Sbjct: 1223 ILPPPPVKSPPPPAP 1237


>10_03_0023 - 7151465-7152111,7152222-7152405
          Length = 276

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
 Frame = +1

Query: 598 PXXLSPXXLHXRPPXXXXPXXPXLXPXTXPXXPXXXX-----PXXXLXXXPXXSPKXXLA 762
           P  ++P      PP    P  P + P   P  P         P   L   P   P   L 
Sbjct: 189 PNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNPPPPPPPPPSLL 248

Query: 763 PPXXSXPPXXP 795
           PP    PP  P
Sbjct: 249 PPVPLLPPLIP 259


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/53 (28%), Positives = 15/53 (28%)
 Frame = +1

Query: 637  PXXXXPXXPXLXPXTXPXXPXXXXPXXXLXXXPXXSPKXXLAPPXXSXPPXXP 795
            P    P  P L P   P  P    P       P   P     PP    PP  P
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLP 1202


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/74 (22%), Positives = 20/74 (27%)
 Frame = +3

Query: 573 PAPXAXXXXRGXFPPKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQX 752
           P P      +   PP    +P          P P + P       P   P   P   P  
Sbjct: 226 PPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTP 285

Query: 753 PPRPXXXLLTPXPP 794
            P P      P PP
Sbjct: 286 TPTPYTPTPKPNPP 299


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
 Frame = +1

Query: 586 PXXXPXXLSPXXLHXRPPXXXXPXXPXLXPXTXPXXPXXXX---PXXXLXXXPXXSPKXX 756
           P   P   SP  L   P     P  P   P   P  P       P       P   P   
Sbjct: 39  PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAAS 98

Query: 757 LAPPXXSXPPXXP 795
             PP  S PP  P
Sbjct: 99  PPPPPPSPPPPSP 111



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +2

Query: 671 APPXXXXXPXPXPPXXXXXXXXXXPPXPXSPXRGXPXP 784
           +PP     P P PP          PP P SP +  P P
Sbjct: 82  SPPPPPLPPPPPPPAASPPPPPPSPPPP-SPVKSSPPP 118


>04_04_1125 + 31085106-31085714
          Length = 202

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +2

Query: 383 TPXXTPPXXXAXAXPXXRXPPRPAGSTPT 469
           TP   PP     A P     P PA STPT
Sbjct: 81  TPATPPPTPATPATPTTPPTPAPAPSTPT 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,982,790
Number of Sequences: 37544
Number of extensions: 192123
Number of successful extensions: 1065
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)