Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_E08
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 29 5.6
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 29 5.6
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 29 5.6
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 29 5.6
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 29 5.6
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 29 5.6
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 29 5.6
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 29 5.6
BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p pro... 29 9.7
AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p pro... 29 9.7
AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protei... 29 9.7
AF348329-1|AAK31343.1| 749|Drosophila melanogaster Brahma-assoc... 29 9.7
AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA... 29 9.7
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 783 GXGXPRXGEXGFGGXXXXXXXXXXGGXGXGXXXXXGGAKXR 661
G G R G GFGG GG G G GG R
Sbjct: 50 GGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGR 90
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +2
Query: 548 PKPXXXXXPCAXRXXXXPXXFPPXXCTIAXXLXXXXXXLXXAPPXXXXXPXPXPPXXXXX 727
P P P + P PP TI L PP P PP
Sbjct: 110 PAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPT 169
Query: 728 XXXXXPPXPXSPXRGXPXP 784
PP P P P P
Sbjct: 170 VEPPPPPPPAPPTVEPPPP 188
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
protein.
Length = 1458
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 229 HAPHHALCSHDHSGSGVRSQVLERLEM 309
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 229 HAPHHALCSHDHSGSGVRSQVLERLEM 309
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 229 HAPHHALCSHDHSGSGVRSQVLERLEM 309
H PHH H H+G+G Q E+L++
Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQL 971
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +2
Query: 548 PKPXXXXXPCAXRXXXXPXXFPPXXCTIAXXLXXXXXXLXXAPPXXXXXPXPXPPXXXXX 727
P P P + P PP TI L PP P PP
Sbjct: 373 PAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPT 432
Query: 728 XXXXXPPXPXSPXRGXPXP 784
PP P P P P
Sbjct: 433 VEPPPPPPPAPPTVEPPPP 451
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +2
Query: 548 PKPXXXXXPCAXRXXXXPXXFPPXXCTIAXXLXXXXXXLXXAPPXXXXXPXPXPPXXXXX 727
P P P + P PP TI L PP P PP
Sbjct: 373 PAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPT 432
Query: 728 XXXXXPPXPXSPXRGXPXP 784
PP P P P P
Sbjct: 433 VEPPPPPPPAPPTVEPPPP 451
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 783 GXGXPRXGEXGFGGXXXXXXXXXXGGXGXGXXXXXGGAKXR 661
G G R G GFGG GG G G GG R
Sbjct: 43 GGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGR 83
>BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +3
Query: 615 PKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQXPPRP 764
P+ P P P H P P P + P +P PP P
Sbjct: 520 PQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPP 569
>AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p
protein.
Length = 457
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +3
Query: 615 PKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQXPPRP 764
P+ P P P H P P P + P +P PP P
Sbjct: 228 PQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPP 277
>AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protein
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +3
Query: 615 PKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQXPPRP 764
P+ P P P H P P P + P +P PP P
Sbjct: 520 PQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPP 569
>AF348329-1|AAK31343.1| 749|Drosophila melanogaster
Brahma-associated protein 111kD protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +3
Query: 615 PKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQXPPRP 764
P+ P P P H P P P + P +P PP P
Sbjct: 520 PQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPP 569
>AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +3
Query: 615 PKXAXSPXXXXXSXXXXPXPXHXPXXXXXXXPXXXPXEXPXXIPQXPPRP 764
P+ P P P H P P P + P +P PP P
Sbjct: 520 PQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPP 569
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,353,643
Number of Sequences: 53049
Number of extensions: 282933
Number of successful extensions: 1368
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -