Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_E04
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 150 1e-36
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 150 1e-36
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 150 1e-36
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 150 1e-36
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 150 1e-36
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 150 1e-36
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.9
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 392
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDW 196
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 392
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDW 196
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 294
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 144 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDW 98
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 344
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 582 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -3
Query: 667 VSAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 392
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDW 196
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 294
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 144 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDW 98
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 344
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 582 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -3
Query: 667 VSAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 150 bits (364), Expect = 1e-36
Identities = 68/96 (70%), Positives = 81/96 (84%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 392
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/107 (43%), Positives = 64/107 (59%)
Frame = -1
Query: 750 IQLNXGTXEXQSEMGPENXWRNLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYP 571
IQ+N GT E + + E+ + + + + + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Query: 570 VRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 430
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 785 VKQRQKKAHIMESNLTGVPXRXKVKW 708
+++RQKKAH++E + G KV W
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDW 196
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 9 FFFALSNVYFHGRHLRLRCSRWGCGSRSFFAI-TILLECTHECS 137
+F + VY+ R +++ SRWG S F + + LL T C+
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICA 322
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 372 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 497
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 199 SNSLTPRPSSVMVDSRRRLTRLHSWVHSRRIVIAKKLRLP 80
+NSLT PSS +V+ R LT L+ ++S V L P
Sbjct: 195 TNSLTSIPSSALVNQRNTLTNLNLGLNSINEVPVGALDFP 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,608,504
Number of Sequences: 27780
Number of extensions: 397716
Number of successful extensions: 956
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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