Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_E02
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    50   2e-05
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   10.0 
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    30   10.0 
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   10.0 

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 49.6 bits (113), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +1

Query: 730 KXNVAMNAWLPQAXYPCGNFSGTSC 804
           K +VAMNAW PQA YPCGNFS TSC
Sbjct: 11  KSDVAMNAWPPQASYPCGNFSDTSC 35


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 477 TPLRPKPA*PNPARICSLWSPESRE 403
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
 Frame = +3

Query: 51  PXRTXFSXSRPRPAARA-HVAXXXXXXLGPHHLAQGXVSTVSQHXAALPSTTPRQXRKSS 227
           P R     S   P  RA H +        P H + G      +H +  PS  PR+ R  S
Sbjct: 177 PRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGASPRRVRHDSPDPSP-PRRARHGS 235

Query: 228 TDXSEPRHRTELYPDLRSR 284
           +D S PR      PD   R
Sbjct: 236 SDISSPRRVHNNSPDTSRR 254


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 477 TPLRPKPA*PNPARICSLWSPESRE 403
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,263,275
Number of Sequences: 237096
Number of extensions: 2383447
Number of successful extensions: 4881
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4870
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)