Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_D24
(834 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein. 195 7e-50
S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein. 195 7e-50
BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p pro... 195 7e-50
AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p pro... 195 7e-50
AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA... 195 7e-50
L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein. 193 3e-49
BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p pro... 33 0.36
AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA... 33 0.36
AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p pro... 31 1.5
AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-P... 31 1.5
AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-P... 31 1.5
AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-P... 31 1.5
BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p pro... 30 4.5
AY094651-1|AAM11004.1| 119|Drosophila melanogaster AT10144p pro... 30 4.5
AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p pro... 30 4.5
AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,... 30 4.5
AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,... 30 4.5
>X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein.
Length = 802
Score = 195 bits (475), Expect = 7e-50
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 442 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 501
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIARVQCAEVWCPM+PEF
Sbjct: 502 FLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPEF 538
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1
Query: 315 REYLVQKINKKMLLYVMNPSKFRGNQ 238
REYL K +KKMLLYVMNPSKFR Q
Sbjct: 540 REYLTTKTSKKMLLYVMNPSKFRSCQ 565
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 416 AKDKPMGCGILVTTYSMITHTQ 437
>S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein.
Length = 802
Score = 195 bits (475), Expect = 7e-50
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 442 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 501
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIARVQCAEVWCPM+PEF
Sbjct: 502 FLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPEF 538
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1
Query: 315 REYLVQKINKKMLLYVMNPSKFRGNQ 238
REYL K +KKMLLYVMNPSKFR Q
Sbjct: 540 REYLTTKTSKKMLLYVMNPSKFRSCQ 565
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 416 AKDKPMGCGILVTTYSMITHTQ 437
>BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p
protein.
Length = 798
Score = 195 bits (475), Expect = 7e-50
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 438 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 497
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIARVQCAEVWCPM+PEF
Sbjct: 498 FLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPEF 534
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1
Query: 315 REYLVQKINKKMLLYVMNPSKFRGNQ 238
REYL K +KKMLLYVMNPSKFR Q
Sbjct: 536 REYLTTKTSKKMLLYVMNPSKFRSCQ 561
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 412 AKDKPMGCGILVTTYSMITHTQ 433
>AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p
protein.
Length = 798
Score = 195 bits (475), Expect = 7e-50
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 438 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 497
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIARVQCAEVWCPM+PEF
Sbjct: 498 FLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPEF 534
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1
Query: 315 REYLVQKINKKMLLYVMNPSKFRGNQ 238
REYL K +KKMLLYVMNPSKFR Q
Sbjct: 536 REYLTTKTSKKMLLYVMNPSKFRSCQ 561
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 412 AKDKPMGCGILVTTYSMITHTQ 433
>AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA
protein.
Length = 798
Score = 195 bits (475), Expect = 7e-50
Identities = 88/97 (90%), Positives = 92/97 (94%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 438 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 497
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIARVQCAEVWCPM+PEF
Sbjct: 498 FLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPEF 534
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1
Query: 315 REYLVQKINKKMLLYVMNPSKFRGNQ 238
REYL K +KKMLLYVMNPSKFR Q
Sbjct: 536 REYLTTKTSKKMLLYVMNPSKFRSCQ 561
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 412 AKDKPMGCGILVTTYSMITHTQ 433
>L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein.
Length = 801
Score = 193 bits (470), Expect = 3e-49
Identities = 87/97 (89%), Positives = 91/97 (93%)
Frame = -3
Query: 610 EAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIADLN 431
EAEQTM+WLQ QEWG++VLDEVHTIPAKMFRRVLTIV SH KLGLTATLLREDDKIADLN
Sbjct: 442 EAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLN 501
Query: 430 FLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEF 320
FLIGPKLYEANWLELQ GYIAR QCAEVWCPM+PEF
Sbjct: 502 FLIGPKLYEANWLELQKKGYIARCQCAEVWCPMSPEF 538
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 687 SQDKPMGAGILVTTXSMITHGQ 622
++DKPMG GILVTT SMITH Q
Sbjct: 416 AKDKPMGCGILVTTYSMITHTQ 437
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = -1
Query: 360 CSAPRCGAP*RQSSNREYLVQKINKKMLLYVMNPSKFRGNQ 238
C P REYL K +KKMLLYV NPSKFR Q
Sbjct: 525 CQCAEVWCPMSPEFYREYLTTKTSKKMLLYV-NPSKFRSCQ 564
>BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p
protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 488 GVRVHDGEHPAEHFGRYRVHFVEHDQAPLLG 580
G R H G H HFG + FVEH P G
Sbjct: 427 GYRPHHGGHHGHHFGPHHGPFVEHGHGPQFG 457
>AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA
protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 488 GVRVHDGEHPAEHFGRYRVHFVEHDQAPLLG 580
G R H G H HFG + FVEH P G
Sbjct: 427 GYRPHHGGHHGHHFGPHHGPFVEHGHGPQFG 457
>AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p
protein.
Length = 606
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 658 PRNDVXHDNSRTETLVEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLG 479
PR + + +EAE+T Q + WGL+ +E + PA + + +S LG
Sbjct: 268 PRGKLAQQKYALQHSLEAEKTWLQCQCERWGLLAQEESRSTPALLTSSSSALENSVLSLG 327
Query: 478 LT 473
++
Sbjct: 328 VS 329
>AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-PA,
isoform A protein.
Length = 606
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 658 PRNDVXHDNSRTETLVEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLG 479
PR + + +EAE+T Q + WGL+ +E + PA + + +S LG
Sbjct: 268 PRGKLAQQKYALQHSLEAEKTWLQCQCERWGLLAQEESRSTPALLTSSSSALENSVLSLG 327
Query: 478 LT 473
++
Sbjct: 328 VS 329
>AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-PB,
isoform B protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 658 PRNDVXHDNSRTETLVEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLG 479
PR + + +EAE+T Q + WGL+ +E + PA + + +S LG
Sbjct: 268 PRGKLAQQKYALQHSLEAEKTWLQCQCERWGLLAQEESRSTPALLTSSSSALENSVLSLG 327
Query: 478 LT 473
++
Sbjct: 328 VS 329
>AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-PC,
isoform C protein.
Length = 896
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 658 PRNDVXHDNSRTETLVEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLG 479
PR + + +EAE+T Q + WGL+ +E + PA + + +S LG
Sbjct: 268 PRGKLAQQKYALQHSLEAEKTWLQCQCERWGLLAQEESRSTPALLTSSSSALENSVLSLG 327
Query: 478 LT 473
++
Sbjct: 328 VS 329
>BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p
protein.
Length = 1449
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 711 HDXQVHIRSQDKPMGAGILVTTXSMITH 628
H+ + HI+S KP+G IL+ T S +TH
Sbjct: 488 HEWKAHIKSL-KPLGLAILLNTCSPLTH 514
>AY094651-1|AAM11004.1| 119|Drosophila melanogaster AT10144p
protein.
Length = 119
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +1
Query: 424 SGSSGPRSCRPLAAGSPSNPVWRASAR 504
SGS RSC P AAGS S W ASAR
Sbjct: 47 SGSEQRRSCGP-AAGSRSADSWTASAR 72
>AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p
protein.
Length = 1126
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 711 HDXQVHIRSQDKPMGAGILVTTXSMITH 628
H+ + HI+S KP+G IL+ T S +TH
Sbjct: 165 HEWKAHIKSL-KPLGLAILLNTCSPLTH 191
>AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,
isoform B protein.
Length = 1126
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 711 HDXQVHIRSQDKPMGAGILVTTXSMITH 628
H+ + HI+S KP+G IL+ T S +TH
Sbjct: 165 HEWKAHIKSL-KPLGLAILLNTCSPLTH 191
>AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,
isoform A protein.
Length = 1449
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 711 HDXQVHIRSQDKPMGAGILVTTXSMITH 628
H+ + HI+S KP+G IL+ T S +TH
Sbjct: 488 HEWKAHIKSL-KPLGLAILLNTCSPLTH 514
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,006,572
Number of Sequences: 53049
Number of extensions: 673097
Number of successful extensions: 1774
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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