Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_D16
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.009
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.009
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.009
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.037
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 36 0.048
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 35 0.064
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 35 0.064
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 35 0.064
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 35 0.064
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.084
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.11
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.11
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.15
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 34 0.15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.15
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 33 0.34
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.45
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 32 0.60
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.60
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.60
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.60
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.60
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.60
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.60
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.79
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.79
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 1.8
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.2
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 3.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.5
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 5.5
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 5.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.3
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 7.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 7.3
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 7.3
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 9.7
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 9.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
SPP PPPP P R P SPP P PR P P PR
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 633 RSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
R P PPPP P SP P+ SPP P PP P
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 813 XP 818
P
Sbjct: 289 PP 290
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPP 791
SPP PPPP P P SPP P R +PP
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPP 743
SPP PPPP R P P SPP
Sbjct: 320 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
SPP PPPP P R P SPP P PR P P PR
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 633 RSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
R P PPPP P SP P+ SPP P PP P
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 813 XP 818
P
Sbjct: 310 PP 311
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPP 791
SPP PPPP P P SPP P R +PP
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPP 743
SPP PPPP R P P SPP
Sbjct: 341 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
SPP PPPP P R P SPP P PR P P PR
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 633 RSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPR 812
R P PPPP P SP P+ SPP P PP P
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 813 XP 818
P
Sbjct: 295 PP 296
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPP 791
SPP PPPP P P SPP P R +PP
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPP 743
SPP PPPP R P P SPP
Sbjct: 326 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.037
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXG-GXXXDGXXXGDXRXXXGXXGGVGG--GGXAXVX 647
G G G GG G GR G G G G G+ G GG G GG
Sbjct: 70 GNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNN 129
Query: 646 XGGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG G G P WGG
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGG 159
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -1
Query: 808 GXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXG 641
G G GG GRG G GG G G G GG GGG + G
Sbjct: 131 GGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERIAEG 186
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/84 (26%), Positives = 22/84 (26%)
Frame = -1
Query: 808 GXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGGXRX 629
G G G G G G G G GD G G GG G GG
Sbjct: 34 GWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGG 93
Query: 628 XHXXXSGXXXXGSPXXXRXXXWGG 557
G G WGG
Sbjct: 94 GGRGGGGRGDWGGNNNGGGGNWGG 117
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
PP PP PP P SP P P P P P+PP P
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
PP + A P PP P R P P PP P PR P P P
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 657 AXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRP-VPPVXPXXPR 812
A PPPP PP SP P PP P P P PP+ P P+
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPP----PPRVPRTPPPRSPPPRRPPMTPPSPQ 168
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = +3
Query: 663 PPPPTP--PXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRP-VPPVXPXXPRXP 818
PPPP P P P P P P R P P PP P P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGG 662
G G G GGTGRGR G G G G GG GGGG
Sbjct: 810 GYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGG 861
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
S P T PPPP PP P PP +P P PP P
Sbjct: 17 SAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAP 71
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 666 PPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
P P PP P P P PP P P P P P P
Sbjct: 108 PAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 657 AXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
A PP P P P P P P + P P P P P P
Sbjct: 96 APPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYP 149
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSP-PXXPXXRXXXLPRPVPPVXPXXPR 812
+P PPPP PP P P P+ S R + PP P P+
Sbjct: 124 APAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQ 183
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 35.1 bits (77), Expect = 0.064
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTG--RGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVG 671
GR G G G GG G R G GG G G+ G GG G
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGG 230
Query: 670 GGGXAXVXX--GGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG GG G G P + WGG
Sbjct: 231 QGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGG 270
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.064
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTG--RGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVG 671
GR G G G GG G R G GG G G+ G GG G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGG 268
Query: 670 GGGXAXVXX--GGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG GG G G P + WGG
Sbjct: 269 QGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGG 308
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 663 PPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
PPPP PP P +P P PP +P PVPP P
Sbjct: 1338 PPPPPPPPPPPSDDLTP--VPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP + P P PP P +P P PP LP P PP+ + P
Sbjct: 1345 PPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNP 1404
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVP---PVXPXX 806
+PP T PPPPT P +P P+ +PP + PVP PV
Sbjct: 174 APPPPTTKAPPPPTTKAPPPPTTKAP-PPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPA 232
Query: 807 PRXP 818
P P
Sbjct: 233 PNPP 236
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 633 RSPPXXTXAXPPPPT---PPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPP 791
++PP T PPPPT PP P + P P P PP
Sbjct: 181 KAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPP 236
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRX 815
+PP PPPP+ P SP SPP P P VPP P P
Sbjct: 465 TPPTTPKPAPPPPSRIPNPSP---SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPP 521
Query: 816 P 818
P
Sbjct: 522 P 522
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTGRGRXXXRXXGXXGGXXX--DGXXXGDXRXXXGXXGGVG 671
GR G G G GG G G G GG G GD G GG G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG 267
Query: 670 GGGXAXVXX--GGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG GG G G P + WGG
Sbjct: 268 QGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGG 307
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTGRGRXXXRXXGXXGGXXX--DGXXXGDXRXXXGXXGGVG 671
GR G G G GG G G G GG G GD G GG G
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG 229
Query: 670 GGGXAXVXX--GGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG GG G G P + WGG
Sbjct: 230 QGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGG 269
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 4/100 (4%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTGRGRXXXRXXGXXGGXXX--DGXXXGDXRXXXGXXGGVG 671
GR G G G GG G G G GG G GD G GG G
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG 267
Query: 670 GGGXAXVXX--GGXRXXHXXXSGXXXXGSPXXXRXXXWGG 557
GG GG G G P + WGG
Sbjct: 268 QGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGG 307
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 799 GXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGG 662
G GG GRG G GG G G G GG GGGG
Sbjct: 87 GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G G GG+G G G GG G G G GG GGGG GG
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = -1
Query: 844 GRXXXXXXXGXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXG-GVGG 668
GR G G G GG G G R G GG G G G G G GG
Sbjct: 67 GRGGGWGNNGGGGNWGGNGGGGNG-GGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Query: 667 GG 662
GG
Sbjct: 126 GG 127
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
+PP PPPP+ P SP SPP P P VPP P P
Sbjct: 458 TPPTTPKPAPPPPSRIPNPSP---SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 642 PXXTXAXPPPPTPPXXPXXXRXSPXXXP-SXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
P A PPPP P P P P +PP P P PV P P P
Sbjct: 190 PVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPV--QDPAPAPVEPSDPAPP 244
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G G G GG+G G G G G+ G GG GGGG GG
Sbjct: 69 GNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGGGFNFNDIGG 128
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G G G GG G G GG G G G G GGGG GG
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGG 118
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.9 bits (69), Expect = 0.60
Identities = 26/84 (30%), Positives = 26/84 (30%)
Frame = -1
Query: 808 GXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGGXRX 629
G G GG GRG G GG G G G G GGG GG
Sbjct: 25 GSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGG----DRGGFGG 80
Query: 628 XHXXXSGXXXXGSPXXXRXXXWGG 557
G GSP R GG
Sbjct: 81 RGSPRGGFGGRGSPRGGRGSPRGG 104
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
+P A PPPP PP P +P + PP P + PP P P
Sbjct: 600 TPENRPHAVPPPP-PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
+P A PPPP PP P +P + PP P + PP P P
Sbjct: 426 TPENRPHAVPPPP-PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
PP A PP P PP + P P PP P P P PP+ P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCP---PPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 663 PPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PPP PP P P PP P P PP P P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +3
Query: 594 PXXXXPXXXLCXXR--SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPP 743
P P +C + PP PPPP PP P P P P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAP 92
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 624 CXXRSPPXXTXAXPPPPTPPXXPXXXR-XSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
C PP PPPP P P P P PP P P P PP+ P
Sbjct: 22 CCSMGPPPC----PPPPPPMCAPPPLPCPPPPICPPQFCPP--PPMCPPPPPPPPPPMCP 75
Query: 801 XXP 809
P
Sbjct: 76 PPP 78
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP PPPP PP P P P P P+ VP V + P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Frame = +3
Query: 549 GTXPPHXXXRXXXGEPXXXXPXXXLCXXRSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPS 728
G PP G P P L PP PPPP P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL-----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 729 XXSPPXXPXXRXXXL---PRPVPPVXPXXPRXP 818
PP P P P PP P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP PPPP PP P P P P P+ VP V + P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Frame = +3
Query: 549 GTXPPHXXXRXXXGEPXXXXPXXXLCXXRSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPS 728
G PP G P P L PP PPPP P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL-----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 729 XXSPPXXPXXRXXXL---PRPVPPVXPXXPRXP 818
PP P P P PP P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP PPPP PP P P P P P+ VP V + P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 403
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Frame = +3
Query: 549 GTXPPHXXXRXXXGEPXXXXPXXXLCXXRSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPS 728
G PP G P P L PP PPPP P P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL-----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Query: 729 XXSPPXXPXXRXXXL---PRPVPPVXPXXPRXP 818
PP P P P PP P P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
PP + PPP PP R P PP P P +P + P P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/85 (28%), Positives = 27/85 (31%), Gaps = 10/85 (11%)
Frame = +3
Query: 594 PXXXXPXXXLCXXRSPPXXTXAXPPPPTP-----PXXPXXXRXSPXXXPSXXSPP----- 743
P P + PP + PPPP P P P P PS PP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 744 XXPXXRXXXLPRPVPPVXPXXPRXP 818
P P +PP P PR P
Sbjct: 334 PPPPPPGMRYPGGMPP--PPPPRYP 356
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 669 PPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP PP P P P+ P P + P PP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP P PP P P P S PP P P PP P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR---TPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXP 809
PP + PPP PP R P PP P P +P + P P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/85 (28%), Positives = 27/85 (31%), Gaps = 10/85 (11%)
Frame = +3
Query: 594 PXXXXPXXXLCXXRSPPXXTXAXPPPPTP-----PXXPXXXRXSPXXXPSXXSPP----- 743
P P + PP + PPPP P P P P PS PP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 744 XXPXXRXXXLPRPVPPVXPXXPRXP 818
P P +PP P PR P
Sbjct: 344 PPPPPPGMRYPGGMPP--PPPPRYP 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 669 PPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP PP P P P+ P P + P PP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP P PP P P P S PP P P PP P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR---TPGPPGMPGMPPPP 330
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G G G GG G G G GG G + G G GG G GG
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 669 PPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
PP PP P +P P+ PP P R +P PP P
Sbjct: 73 PPLPP--PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/61 (26%), Positives = 19/61 (31%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRX 815
+PP PPPP P P SP P P P + + P P
Sbjct: 84 NPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTTAVSPPK 143
Query: 816 P 818
P
Sbjct: 144 P 144
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXP 752
PP P PTPP P P P+ SPP P
Sbjct: 78 PPLPLSNPPAKPTPPPPPPKPTIRPPPIPA--SPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 669 PPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
PP PP P +P P+ PP P R +P PP P
Sbjct: 295 PPLPP--PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/61 (26%), Positives = 19/61 (31%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRX 815
+PP PPPP P P SP P P P + + P P
Sbjct: 306 NPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTTAVSPPK 365
Query: 816 P 818
P
Sbjct: 366 P 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXP 752
PP P PTPP P P P+ SPP P
Sbjct: 300 PPLPLSNPPAKPTPPPPPPKPTIRPPPIPA--SPPPRP 335
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 799 GXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G GG G G G GG G G G GG GGG GG
Sbjct: 75 GGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGG 128
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 624 CXXRSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVP 788
C PP PPPP P P P P+ PP + +P+ VP
Sbjct: 239 CSCLPPPPSPVCMPPPPPPCPMPI---PCPPPPPACSCPPPVTMYQPCMVPQYVP 290
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 790 GGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
GG G G G GG G G G GG GGGG A GG
Sbjct: 93 GGCGGGGGGCGGGGGCGGGGGGGCGGGGG-GGCGGGGGGGGGGYASGGSGG 142
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -1
Query: 799 GXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGGXRXXHX 620
G GG+G G G GG G G GG GG GG
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSG----FGGGNTCGS 82
Query: 619 XXSGXXXXGSPXXXRXXXWGG 557
G GSP +GG
Sbjct: 83 GFGGGSTGGSPYGGASSGFGG 103
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -1
Query: 817 GXRGXXGX-TGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXG 641
G RG TG GRG G GG G G GG+GGGG G
Sbjct: 62 GQRGPFAAMTGSYGRGGYGGSGGGAFGGFNG-GYGQGGYGGGGDFGGGMGGGGYGGGGYG 120
Query: 640 G 638
G
Sbjct: 121 G 121
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -1
Query: 817 GXRGXXGXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGG 638
G G GG G G G GG G G G GG+GGGG GG
Sbjct: 164 GYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG-GGMGGGGYGGGGDGG 222
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Frame = +3
Query: 639 PPXXTXAXPPPPT-----PPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPX 803
PP PPPP PP P P PP P P+P P P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPV 136
Query: 804 XP 809
P
Sbjct: 137 NP 138
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
P PPPPT P R P P P P P P P P
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQ-PEPQPEPQPEPQPEPHPEPAPEP 144
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPP 791
SP P P PP P P P+ PP P P P PP
Sbjct: 77 SPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPP-PPAPAAPCCPPPPPP 127
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 633 RSPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
R P PP P PP P SP PS P P P PP P
Sbjct: 75 RPSPSCCPYVPPAPLPPPPPP---ASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +3
Query: 639 PPXXTXAXPPP-PTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRX 815
PP P P P P P PS PP P RP P P R
Sbjct: 209 PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
Query: 816 P 818
P
Sbjct: 269 P 269
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 669 PPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXPXXPRXP 818
PP+P SP P PP P R P P P P P P
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP-PTRRPPGPPGP 274
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 594 PXXXXPXXXLCXXRSPPXXTXAXPPPPTP-PXXPXXXRXSPXXXPSXXSPPXXPXXRXXX 770
P P +C PP PPPP P P P + PS P P
Sbjct: 61 PAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQ-----RPSFY-PSYVPQYYQPM 114
Query: 771 LPRPVP 788
+P+P+P
Sbjct: 115 MPQPMP 120
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/93 (24%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +3
Query: 537 RGXXGTXP-PHXXXRXXXGEPXXXXPXXXLCXXRSPPXXTXAXPPP----PTPPXXPXXX 701
RG G P P R P +C P PPP P PP P
Sbjct: 24 RGGCGGCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPP 83
Query: 702 RXSPXXXPSXXSPPXXPXXRXXXLPRPVPPVXP 800
P PS P +P+ P+ P
Sbjct: 84 PPPPMPRPSCPCMMQRPSFYPSYVPQYYQPMMP 116
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -1
Query: 799 GXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGGXRXXHX 620
G GG+G G G GG G G GG GG GG
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSG----FGGGNTCGS 82
Query: 619 XXSGXXXXGSPXXXRXXXWGG 557
G GSP +GG
Sbjct: 83 GFGGGSTGGSPYGGASSGFGG 103
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -1
Query: 799 GXTGGTGRGRXXXRXXGXXGGXXXDGXXXGDXRXXXGXXGGVGGGGXAXVXXGGXRXXHX 620
G GG+G G G GG G G GG GG GG
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSG----FGGGNTCGS 82
Query: 619 XXSGXXXXGSPXXXRXXXWGG 557
G GSP +GG
Sbjct: 83 GFGGGSTGGSPYGGASSGFGG 103
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 639 PPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPP 743
PP + PPPP PP P +P S P
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQTPSASSSVTFSP 383
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +3
Query: 663 PPPPTPPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXLPR--PVPPVXP 800
PPPP PP P P + PP P LPR P P + P
Sbjct: 97 PPPPPPPVAP---HQPPPQLATSAQPPQPPVIN-SQLPRMSPAPAIPP 140
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 609 PXXXLCXXRSPPXXTXAXPPPPTPP 683
P C PP A PPPP PP
Sbjct: 34 PAAPACAPPPPPMCGCAPPPPPPPP 58
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 657 AXPPPPTPPXXPXXXRXSPXXXPSXXSP 740
A PPPP PP SP P+ SP
Sbjct: 132 AAPPPPPPPAAAAAAPISPKAAPTPQSP 159
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 642 PXXTXAXPPPPT-PPXXPXXXRXSPXXXPSXXSPPXXPXXRXXXL-PRPVPPVXPXXP 809
P T PP P PP P R S + P P P P+ PV P P
Sbjct: 331 PEPTAQTPPAPAAPPAAPALNRQSTIPPVAMTQRPMIPPSLPSSTPPAPLKPVAPPTP 388
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXP-SXXSPPXXPXXRXXXLPRPV 785
SP P PP PP P +P P +PP P + PRP+
Sbjct: 537 SPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAK----PRPL 583
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 636 SPPXXTXAXPPPPTPPXXPXXXRXSPXXXPSXXSPPXXP 752
S P T PPPP PP P + P+ + P
Sbjct: 819 SQPLSTLPPPPPPNPPPAPQPPSSAASLTPAPSAAQNAP 857
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,980,974
Number of Sequences: 27780
Number of extensions: 162557
Number of successful extensions: 1705
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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