Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_D13
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.5  
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721...    30   2.6  
02_02_0498 - 10973243-10973345,10973850-10973882,10974104-109741...    29   3.4  
10_07_0028 + 12019827-12020000,12020083-12020505,12020583-120206...    28   7.8  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/65 (29%), Positives = 21/65 (32%)
 Frame = +3

Query: 582 PXXSPKRTPPXPXXPXPXXLPXKSXXNXSASAXRXLXXRAXXXXPXXPLXPPPXPXXPXT 761
           P  SP   PP P  P P  LP  +  +                 P  P  PPP P  P  
Sbjct: 559 PAFSP---PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNR 615

Query: 762 SXSXP 776
           S   P
Sbjct: 616 SVPPP 620


>12_01_0790 +
           7216452-7216489,7216664-7216722,7217268-7218750,
           7218828-7218892,7219023-7219080,7219152-7219262,
           7219332-7219410,7219521-7219613,7219701-7219886
          Length = 723

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/77 (27%), Positives = 27/77 (35%)
 Frame = +3

Query: 534 PPXXHLASXTXRIXXHPXXSPKRTPPXPXXPXPXXLPXKSXXNXSASAXRXLXXRAXXXX 713
           PP   ++     +   P  SP  +PP P  P    L  K      AS+       A    
Sbjct: 254 PPRIPVSPSHPPVVARPRDSPIASPPRPEPPVASPLGPKPLV---ASSRGPEPPVASPPV 310

Query: 714 PXXPLXPPPXPXXPXTS 764
           P  P+  PP P  P  S
Sbjct: 311 PEPPVASPPVPEPPVAS 327


>02_02_0498 -
           10973243-10973345,10973850-10973882,10974104-10974166,
           10975934-10976004,10976703-10976789,10976870-10976983,
           10977395-10977508,10977784-10977844,10978608-10978923,
           10979031-10979721,10979948-10980073,10980180-10980247,
           10980314-10980449,10981109-10981238,10981266-10981382,
           10981614-10981763,10982158-10982266,10982584-10982701,
           10984143-10984168,10984219-10984256,10986267-10986373
          Length = 925

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 187 SHSWAPGVVSVDQLVEGEDLGSRLLPLSSTGGAESDITRSD 65
           SH+ A G+  V+  ++     SRLL  SST   ES   R D
Sbjct: 487 SHASASGLSGVEMQIDRGQPSSRLLGSSSTSNHESSTARDD 527


>10_07_0028 +
           12019827-12020000,12020083-12020505,12020583-12020642,
           12020709-12020822,12020903-12020908
          Length = 258

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/68 (27%), Positives = 25/68 (36%)
 Frame = +3

Query: 582 PXXSPKRTPPXPXXPXPXXLPXKSXXNXSASAXRXLXXRAXXXXPXXPLXPPPXPXXPXT 761
           P  SPK+TPP P  P           + S      +  ++    P  P+ PPP P  P  
Sbjct: 180 PSASPKQTPPTPSAP----------AHFSRKKKTPVRKKSAVASP-KPIPPPPRPPSPPV 228

Query: 762 SXSXPDXT 785
                D T
Sbjct: 229 QSESSDHT 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,764,475
Number of Sequences: 37544
Number of extensions: 183366
Number of successful extensions: 927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)