Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_D11
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 33 0.45
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 33 0.45
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 33 0.45
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 33 0.45
AF121361-3|AAD37505.1| 277|Drosophila melanogaster zinc finger ... 30 4.2
AF121360-1|AAD34351.1| 277|Drosophila melanogaster DNZDHHC/NEW1... 30 4.2
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 29 5.6
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 29 5.6
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 29 5.6
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 33.1 bits (72), Expect = 0.45
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -1
Query: 787 GSVXWIXRLDXSTPIXMQLDNWPNDMQTXTFKFGXRMHNSDEMDFVI--DKRIYSM---F 623
G V W+ + + + +P D QT KFG N D++ + +K + +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYW 197
Query: 622 ESGAWDVTDL 593
+SG WD+ ++
Sbjct: 198 KSGTWDIIEV 207
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 33.1 bits (72), Expect = 0.45
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -1
Query: 787 GSVXWIXRLDXSTPIXMQLDNWPNDMQTXTFKFGXRMHNSDEMDFVI--DKRIYSM---F 623
G V W+ + + + +P D QT KFG N D++ + +K + +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYW 197
Query: 622 ESGAWDVTDL 593
+SG WD+ ++
Sbjct: 198 KSGTWDIIEV 207
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 33.1 bits (72), Expect = 0.45
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -1
Query: 787 GSVXWIXRLDXSTPIXMQLDNWPNDMQTXTFKFGXRMHNSDEMDFVI--DKRIYSM---F 623
G V W+ + + + +P D QT KFG N D++ + +K + +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYW 197
Query: 622 ESGAWDVTDL 593
+SG WD+ ++
Sbjct: 198 KSGTWDIIEV 207
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 33.1 bits (72), Expect = 0.45
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -1
Query: 787 GSVXWIXRLDXSTPIXMQLDNWPNDMQTXTFKFGXRMHNSDEMDFVI--DKRIYSM---F 623
G V W+ + + + +P D QT KFG N D++ + +K + +
Sbjct: 138 GEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYW 197
Query: 622 ESGAWDVTDL 593
+SG WD+ ++
Sbjct: 198 KSGTWDIIEV 207
>AF121361-3|AAD37505.1| 277|Drosophila melanogaster zinc finger
protein protein.
Length = 277
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 625 TYCIFFCQSRNPFRHYCASXNRT*TXKSACRWANCLTAXKLEC-XCPSALS 774
T C+ FC +R P+R Y S W C A C CP+ +S
Sbjct: 211 TSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWRMCSDADIRRCGCCPAPVS 261
>AF121360-1|AAD34351.1| 277|Drosophila melanogaster DNZDHHC/NEW1
zinc finger protein11 protein.
Length = 277
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 625 TYCIFFCQSRNPFRHYCASXNRT*TXKSACRWANCLTAXKLEC-XCPSALS 774
T C+ FC +R P+R Y S W C A C CP+ +S
Sbjct: 211 TSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWRMCSDADIRRCGCCPAPVS 261
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
protein.
Length = 1458
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEM 308
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEM 308
H PHH H H+G+G Q E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEM 308
H PHH H H+G+G Q E+L++
Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQL 971
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,489,793
Number of Sequences: 53049
Number of extensions: 471939
Number of successful extensions: 1289
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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