Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_D10
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819...    29   3.4  
02_05_0795 - 31792231-31794780                                         29   5.9  

>10_08_0962 +
           21880919-21880983,21881100-21881487,21881807-21881931,
           21882374-21882374,21882891-21883115,21888956-21889083,
           21889176-21889227,21890205-21890351,21890444-21890566,
           21890648-21890722,21890812-21890931,21892546-21892632,
           21893115-21893183,21893262-21893353,21893465-21893584,
           21893725-21893767,21893848-21893910,21894091-21894162,
           21894247-21894291,21894354-21894424,21894508-21894573,
           21894715-21894799
          Length = 753

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 25/75 (33%), Positives = 34/75 (45%)
 Frame = +2

Query: 26  LRGWLQRDEYHVVGLLAPPTVHPMHTNYRECLSDQVLLNVVYV*FFRYSAYYYAELAVLL 205
           LRG LQ D  H   ++ P TV  + T  +E       LN+V V   +   Y      + L
Sbjct: 273 LRGLLQADVIHNAMIICPVTV--IETWRKE-------LNIVGVLVIKVFRYDRRTDCIAL 323

Query: 206 KSIGVETYVLLSEVC 250
           KSI  E Y L++  C
Sbjct: 324 KSIATEFYALMNFCC 338


>02_05_0795 - 31792231-31794780
          Length = 849

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/37 (51%), Positives = 20/37 (54%)
 Frame = +1

Query: 28  PGLAPTRRVSCCRAACPAHCASDAH*L*GVPERSGPP 138
           PG+ PT  V   RAA  A   S AH L GVP R G P
Sbjct: 117 PGMIPTAGVRVLRAA--ASAPSAAH-LNGVPRRRGRP 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,131,966
Number of Sequences: 37544
Number of extensions: 395716
Number of successful extensions: 909
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)