Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_D10
         (823 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putat...    42   0.001
BT014916-1|AAT47767.1|  409|Drosophila melanogaster RE14563p pro...    42   0.001
AF237761-1|AAF81410.1|  501|Drosophila melanogaster unknown prot...    36   0.089
U78084-1|AAB53369.1|  527|Drosophila melanogaster presenilin pro...    30   4.4  
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl...    30   4.4  

>X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putative
           RNA bindingprotein protein.
          Length = 565

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 23/89 (25%), Positives = 45/89 (50%)
 Frame = -1

Query: 301 HGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELDIDYVKEDLIA 122
           H I++++ T  DHR ++ YL      ++TY L+  + L+VV++G+   +    + E L A
Sbjct: 259 HEIKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEALKA 318

Query: 121 QALPIVSVHRMHSGRGKQPYNMILVALEP 35
           +     +   +   + K P  +  + LEP
Sbjct: 319 KNFSAKTAINI-LNKDKVPQPLFKIELEP 346


>BT014916-1|AAT47767.1|  409|Drosophila melanogaster RE14563p
           protein.
          Length = 409

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 23/89 (25%), Positives = 45/89 (50%)
 Frame = -1

Query: 301 HGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELDIDYVKEDLIA 122
           H I++++ T  DHR ++ YL      ++TY L+  + L+VV++G+   +    + E L A
Sbjct: 103 HEIKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEALKA 162

Query: 121 QALPIVSVHRMHSGRGKQPYNMILVALEP 35
           +     +   +   + K P  +  + LEP
Sbjct: 163 KNFSAKTAINI-LNKDKVPQPLFKIELEP 190


>AF237761-1|AAF81410.1|  501|Drosophila melanogaster unknown
           protein.
          Length = 501

 Score = 35.5 bits (78), Expect = 0.089
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
 Frame = -1

Query: 295 IQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELDIDYVKEDLIAQA 116
           +++  A     R +  +L  E   FH Y L+EDR  RV ++G+        +K++L    
Sbjct: 164 LRLYAADANTFRTIVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIG 223

Query: 115 LPIVSVH----RMHSGRGK-QPYNMILV 47
             ++ +H    R   G  K  P NM  +
Sbjct: 224 HKVLDIHTPLRRNEPGTSKASPVNMFFL 251


>U78084-1|AAB53369.1|  527|Drosophila melanogaster presenilin
           protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 466 PTPVSRLPAGGRRSRILFASSWSSGTPRREYAFYRALRFGTHPXSRL 606
           P  V R P G R SR+    S S G P  E    + L++G     +L
Sbjct: 61  PNVVMREPCGSRPSRLTGGRSGSGGPPTNEMEEEQGLKYGAQHVIKL 107


>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
           single-stranded nucleicacid binding protein protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 14/67 (20%), Positives = 33/67 (49%)
 Frame = -1

Query: 328 NYTHARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELDI 149
           ++T    + + I+I+  T   H A+   L + NI  H++  +  +  ++VIR + +    
Sbjct: 664 SFTTKSELGNNIRIQAKTMDAHNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPT 723

Query: 148 DYVKEDL 128
            +++  L
Sbjct: 724 KWIESQL 730


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,121,756
Number of Sequences: 53049
Number of extensions: 625294
Number of successful extensions: 1647
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)