Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_D07
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 121 7e-28
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 112 3e-25
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 110 1e-24
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 107 7e-24
07_01_0252 + 1883709-1885306,1886338-1886466,1887319-1887341,188... 30 1.8
03_05_0816 + 27928812-27930059,27931007-27931111,27931197-279312... 30 1.8
12_01_0134 + 1017278-1018540,1018626-1019882 29 4.1
11_01_0131 + 1086916-1088127,1088213-1089469 29 4.1
07_01_0130 - 963856-965454 29 4.1
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 29 5.4
01_06_0685 - 31218716-31218873,31218974-31219266,31219366-312195... 29 5.4
12_02_0715 - 22453747-22453935,22454347-22454457,22454514-224545... 28 9.4
>07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 121 bits (291), Expect = 7e-28
Identities = 70/191 (36%), Positives = 101/191 (52%)
Frame = -1
Query: 702 QRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLNVHE 523
Q++ FTRVL+G I + A+FP+ G VLD AR +LW+ LNVHE
Sbjct: 543 QKECFTRVLQGHIALDQAVFPERTPGFVLDVLARSSLWKIGLDYRHGTGHGVGAALNVHE 602
Query: 522 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDRPKAKNLR 343
GP +S+R Y + L G I+SNEPG+Y+ +GIR E+L+ + K NL
Sbjct: 603 GPQSISYR-YGNLTALQKGMIVSNEPGYYEDNSFGIRIENLLLV----------KEVNLP 651
Query: 342 GDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKD 163
+ G LGF LT VP Q + +D +L+ EI+++N YH V + +SP+L
Sbjct: 652 NSFGGVSYLGFEKLTFVPIQSKLVDLSLLSPSEINWINEYHDEVWEKVSPLLSGH----S 707
Query: 162 LEWLEGRCIPI 130
L+WL P+
Sbjct: 708 LDWLRKNTRPL 718
>11_05_0099 - 19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 112 bits (269), Expect = 3e-25
Identities = 66/191 (34%), Positives = 95/191 (49%)
Frame = -1
Query: 702 QRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLNVHE 523
++ +T VLKG I + SA+FP G G+ LD AR LW LNVHE
Sbjct: 518 EKSCYTAVLKGHIALDSAVFPNGTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHE 577
Query: 522 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDRPKAKNLR 343
GP +S+RP + L +++EPG+Y+ G +GIR E+++ + K N +
Sbjct: 578 GPHLISFRPSARNIPLQASMTVTDEPGYYEDGSFGIRLENVLIV----------KEANTK 627
Query: 342 GDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKD 163
++ +G L F +T P Q + ID +LT EI +VNAYH L P L E ++
Sbjct: 628 YNFGDKGYLAFEHITWAPYQTKLIDTTLLTPAEIEWVNAYHADCRKILQPYLNE----QE 683
Query: 162 LEWLEGRCIPI 130
EWL PI
Sbjct: 684 KEWLRKATEPI 694
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 110 bits (265), Expect = 1e-24
Identities = 64/191 (33%), Positives = 95/191 (49%)
Frame = -1
Query: 702 QRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLNVHE 523
++ +T VLKG I + +A+FP G G+ +D AR LW LNVHE
Sbjct: 440 EKSCYTAVLKGHIALDTAVFPNGTTGHAIDILARTPLWRSGLDYRHGTGHGIGSYLNVHE 499
Query: 522 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDRPKAKNLR 343
GP +S+RP + L +++EPG+Y+ G +GIR E+++ + K N +
Sbjct: 500 GPHLISFRPSARNVPLQASMTVTDEPGYYEDGSFGIRLENVLIV----------KEANTK 549
Query: 342 GDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKD 163
++ +G L F +T P Q + ID +LT EI +VNAYH L P L E ++
Sbjct: 550 FNFGDKGYLAFEHITWTPYQTKLIDTTLLTPAEIEWVNAYHSDCRKILQPYLNE----QE 605
Query: 162 LEWLEGRCIPI 130
EWL PI
Sbjct: 606 KEWLRKATEPI 616
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 107 bits (258), Expect = 7e-24
Identities = 63/192 (32%), Positives = 95/192 (49%)
Frame = -1
Query: 702 QRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLNVHE 523
++ +T VLKG I + +A+FP G G+ LD AR LW+ L VHE
Sbjct: 466 EKSCYTAVLKGHIALDTAVFPNGTTGHALDILARTPLWKSGLDYRHGTGHGVGSYLTVHE 525
Query: 522 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDRPKAKNLR 343
GP +S+RP + L +++EPG+Y+ G +GIR E+++ + + N +
Sbjct: 526 GPHQISFRPSARNVPLQASMTVTDEPGYYQDGSFGIRLENVLIV----------QDANTK 575
Query: 342 GDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKD 163
++ +G L F +T P Q + IDA +L EI +VN YH L P L E ++
Sbjct: 576 FNFGDKGYLAFEHITWAPYQTKLIDATLLAPAEIEWVNTYHSDCRRILQPYLNE----QE 631
Query: 162 LEWLEGRCIPIT 127
EWL PIT
Sbjct: 632 KEWLRKATEPIT 643
>07_01_0252 +
1883709-1885306,1886338-1886466,1887319-1887341,
1887455-1888023
Length = 772
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -2
Query: 656 AALYSRKA---LRATFWTASRVTPCGR-WAWTTVTGRVTAWVTTSTCTRVRPVSRGVR 495
A L+S +A +RA W A RV PCG WA T G VT + R R +R R
Sbjct: 39 AGLFSLRASLGIRAREWPA-RVDPCGGGWAGVTCRGGRVVGVTVAGFRRTRVGARAPR 95
>03_05_0816 +
27928812-27930059,27931007-27931111,27931197-27931262,
27931337-27931501,27931671-27931745,27931829-27931983,
27932234-27932369,27932454-27932523,27932602-27932729,
27932838-27932894,27933326-27933511,27934031-27934123,
27934488-27934573,27934668-27934734,27934873-27934939,
27935016-27935152,27935618-27935709,27935849-27935915,
27936058-27936078
Length = 1006
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 447 PGFYKVGEYGIRHEDLIEIVAVDKGSDRPKAKNLRGDYDGRGVLGFS 307
P F+ E+ RH L+ I + +G R KNL + +L FS
Sbjct: 381 PSFFASEEWKRRHAALVTIAQIAEGCARVMIKNLEQAHAASAILNFS 427
>12_01_0134 + 1017278-1018540,1018626-1019882
Length = 839
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 433 FVEARFVAQYLSNVQSRIVG-VRTPRDTGRTLVHVEVVTHAVTRPVTVVQAHLPQGVTRE 609
F + R VA + R++ V PRD L ++VVT + PV V+ HL + V R
Sbjct: 458 FYKRRTVAWAHPESELRVLACVHVPRDVPALLTLLDVVTPSSRSPVGVLALHLIEFVGRS 517
Query: 610 A 612
+
Sbjct: 518 S 518
>11_01_0131 + 1086916-1088127,1088213-1089469
Length = 822
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 433 FVEARFVAQYLSNVQSRIVG-VRTPRDTGRTLVHVEVVTHAVTRPVTVVQAHLPQGVTRE 609
F + R VA + R++ V PRD L ++VVT + PV V+ HL + V R
Sbjct: 441 FYKRRTVAWAHPESELRVLACVHVPRDVPALLTLLDVVTPSSRSPVGVLALHLIEFVGRS 500
Query: 610 A 612
+
Sbjct: 501 S 501
>07_01_0130 - 963856-965454
Length = 532
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 204 TLSPILKERGLLKDLEWLEGRCIPITRK*TLKKLGSLVQQRCKIWFLCESER 49
T S L RGL D E L+ +C+PI +K T+ + ++ C++ E ++
Sbjct: 416 TRSYFLLRRGLGDDFE-LKTKCVPIPKKNTVVQQYCVISDYCRVGVAHEEDQ 466
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 290 GTKVNVLKPKTPRPS*SPLRFFALGRSLPLSTATIS 397
G ++ +L+ P PS SPLR+ +G +PL+ S
Sbjct: 37 GLRLRLLRFSFPSPSSSPLRWVRVGNLVPLNEGNAS 72
>01_06_0685 -
31218716-31218873,31218974-31219266,31219366-31219559,
31219666-31220409,31221504-31221824
Length = 569
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 468 GQILSNEPGFYKVGEYGIRH 409
G L N PG + +G+YG RH
Sbjct: 109 GTYLRNGPGLWNLGDYGFRH 128
>12_02_0715 -
22453747-22453935,22454347-22454457,22454514-22454572,
22454893-22455067,22455255-22455307,22455670-22455739,
22457044-22457218,22457639-22457703,22458196-22460826
Length = 1175
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 478 TERWTDIEQRTWLLQSRGIRNSPRRS 401
TE+W + +Q +++ RG+R P RS
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRS 788
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,310,010
Number of Sequences: 37544
Number of extensions: 405091
Number of successful extensions: 1092
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -