Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_C23
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   5.9  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.8  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.8  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 505 NNTACSANCSAGGEECGLGS--GCPSEQTHF 419
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 505 NNTACSANCSAGGEECG 455
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +2

Query: 104 GSVALVS*GDFVSEFGFVCRREVVGVAPRDVTGLGLQQ 217
           G+  ++   D+     ++C+   +G   RD++ L +Q+
Sbjct: 456 GTKLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQE 493


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 505 NNTACSANCSAGGEECG 455
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 635 RNDTNSNVCYKKCDGACE 582
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 635 RNDTNSNVCYKKCDGACE 582
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 196 DVTRGYSDDLPPTDETE 146
           +++ G +DD+PP  E E
Sbjct: 307 ELSTGMNDDIPPETEEE 323


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 291  NSKKRSKKTKQAPATTASCAAT 226
            + K+   KTK+    TA+ AAT
Sbjct: 1092 DQKQSDDKTKETSTVTAAAAAT 1113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,049
Number of Sequences: 438
Number of extensions: 4083
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)