Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_C22
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 153 2e-38
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 1e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 9e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 60 4e-10
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 58 2e-09
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.009
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.089
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.15
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.20
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.36
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.36
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.62
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.82
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.82
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 1.4
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 2.5
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.3
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.8
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.8
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.7
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.7
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.7
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 7.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 153 bits (372), Expect = 2e-38
Identities = 70/118 (59%), Positives = 91/118 (77%)
Frame = -2
Query: 574 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 395
T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLD 552
Query: 394 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 221
D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 553 DPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 46.0 bits (104), Expect = 7e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -3
Query: 654 PRGVXQXEVTFDIDANGIXNVSAIE 580
PRGV Q EVTFD+DANGI NVSA+E
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALE 490
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (366), Expect = 1e-37
Identities = 69/118 (58%), Positives = 91/118 (77%)
Frame = -2
Query: 574 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 395
T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLD 552
Query: 394 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 221
D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 553 DPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 46.0 bits (104), Expect = 7e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -3
Query: 654 PRGVXQXEVTFDIDANGIXNVSAIE 580
PRGV Q EVTFD+DANGI NVSA+E
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALE 490
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 111 bits (268), Expect = 9e-26
Identities = 53/117 (45%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Frame = -2
Query: 568 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-ED 392
K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +D
Sbjct: 525 KPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDD 584
Query: 391 EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNPIITKMY 224
E+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 585 EQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 40.7 bits (91), Expect = 3e-04
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 654 PRGVXQXEVTFDIDANGIXNVSAIE 580
PRGV Q EVTF++DANG+ VSA++
Sbjct: 495 PRGVPQIEVTFEVDANGVLTVSAVD 519
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 60.1 bits (139), Expect = 4e-10
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = -2
Query: 670 GIPPGPAWRASNXGHLXXXXXXXXXXXXXXXSTNKENKITITNDKGRLSKEEIERMVNEA 491
GIPP P +A +T + I ITN G LS +I+ M+ A
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENA 525
Query: 490 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI---LDKCNDTIK 320
+K++ +D + ++AK+ LESY ++++T+ + + K+ DK I L +C ++
Sbjct: 526 DKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLE 585
Query: 319 WLDSN 305
D+N
Sbjct: 586 LEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 58.0 bits (134), Expect = 2e-09
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = -2
Query: 577 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 398
+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S +
Sbjct: 535 ATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNL 593
Query: 397 E--DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 224
+ +KL ++ + + I D K ++ E+ + K E++ + + +Y
Sbjct: 594 DIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVY 653
Query: 223 Q 221
+
Sbjct: 654 K 654
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3
Query: 654 PRGVXQXEVTFDIDANGIXNVSA 586
P+G Q EV+FD+DA+GI NVSA
Sbjct: 509 PKGQPQIEVSFDVDADGIINVSA 531
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -2
Query: 556 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 386
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 385 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 239
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.089
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 341
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 340 K 338
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.15
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -2
Query: 538 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 359
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 358 KQTILDKCNDTIK 320
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.20
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -2
Query: 571 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 392
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 391 EKLKEKISD 365
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.36
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -2
Query: 538 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 362
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 361 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 263
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -2
Query: 526 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 347
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 346 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 257
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.62
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -2
Query: 550 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 371
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 370 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEGICN 245
D++++ D +K+ L + EY +QK + E I N
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQKRKADAEAIAN 534
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 0.82
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -2
Query: 568 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 389
K N D+ + +EE E ++EK ++ K + KNA ++ M DE
Sbjct: 85 KANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDE 140
Query: 388 KLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 263
+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 141 EESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 538 KGRLSKEEIERMVNEAEKYRNEDD 467
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 382 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 257
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 565 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 407
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 406 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 287
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 343 DKCNDTIKWLDSNQLADKEEYEHKQK 266
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 2.5
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -2
Query: 538 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 368
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 367 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 257
D D++ DT+ D NQ+ +E E QKE++
Sbjct: 281 DKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 556 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 377
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 376 KISDSDKQTILDKCNDTIK 320
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 505 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 401
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 502 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 323
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 322 KWLDSNQLADKEEYEHKQKELEGICNPI 239
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 475 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 314
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 565 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 395
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 371
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 370 SDSDKQTILDKCND 329
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 520 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 350
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 544 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 368
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 367 DSDKQT 350
+D+ T
Sbjct: 695 -TDRLT 699
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = -2
Query: 532 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 356
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 355 QTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 263
+T + + K L +N+L+ E +H +KE
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKE 1041
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 556 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 380
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 379 EKISDSDKQTILDKC 335
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 213 EESPEVCRASRAEHPEPE 160
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 526 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 404
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 538 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 428
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 472 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 296
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 295 DK 290
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 523 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 343 D 341
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 577 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 416
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,576,471
Number of Sequences: 5004
Number of extensions: 45918
Number of successful extensions: 214
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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