Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_C17
         (793 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   144   2e-34
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   144   2e-34
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   144   2e-34

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/130 (53%), Positives = 85/130 (65%)
 Frame = -3

Query: 779 KGPLIIXNKDQVXXGPFXXXPVWXS*MLTX*TXXKLXPGGHFGRFVIWXQSAFGRXDPLF 600
           +GPL++ +KD+     F   P   +  +      KL PGGH GRFVIW +SAF R + LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLF 267

Query: 599 GSWXTPSXQKXNFNLPQPKMANTDLTRXFKFDEIRKVLRXPXKRVIRVTRKLNPLTNNKA 420
           G+W  PS  K  +NLPQPKMANTDL+R  K +EIRKVLR P KRV R  R+LNPLTN + 
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQ 327

Query: 419 MXKXNPYAAV 390
           + K NPYA V
Sbjct: 328 LIKLNPYAEV 337


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/130 (53%), Positives = 85/130 (65%)
 Frame = -3

Query: 779 KGPLIIXNKDQVXXGPFXXXPVWXS*MLTX*TXXKLXPGGHFGRFVIWXQSAFGRXDPLF 600
           +GPL++ +KD+     F   P   +  +      KL PGGH GRFVIW +SAF R + LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLF 267

Query: 599 GSWXTPSXQKXNFNLPQPKMANTDLTRXFKFDEIRKVLRXPXKRVIRVTRKLNPLTNNKA 420
           G+W  PS  K  +NLPQPKMANTDL+R  K +EIRKVLR P KRV R  R+LNPLTN + 
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQ 327

Query: 419 MXKXNPYAAV 390
           + K NPYA V
Sbjct: 328 LIKLNPYAEV 337


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/130 (53%), Positives = 85/130 (65%)
 Frame = -3

Query: 779 KGPLIIXNKDQVXXGPFXXXPVWXS*MLTX*TXXKLXPGGHFGRFVIWXQSAFGRXDPLF 600
           +GPL++ +KD+     F   P   +  +      KL PGGH GRFVIW +SAF R + LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLF 267

Query: 599 GSWXTPSXQKXNFNLPQPKMANTDLTRXFKFDEIRKVLRXPXKRVIRVTRKLNPLTNNKA 420
           G+W  PS  K  +NLPQPKMANTDL+R  K +EIRKVLR P KRV R  R+LNPLTN + 
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQ 327

Query: 419 MXKXNPYAAV 390
           + K NPYA V
Sbjct: 328 LIKLNPYAEV 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,165,377
Number of Sequences: 53049
Number of extensions: 314184
Number of successful extensions: 538
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)