Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_C15
         (855 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein pr...    31   5.3  
BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.        31   5.3  
AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrom...    31   5.3  
AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.              31   5.3  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   5.3  
AB208996-1|BAD92233.1|  489|Homo sapiens ST8 alpha-N-acetyl-neur...    30   9.3  

>BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein
           protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 27/100 (27%), Positives = 31/100 (31%)
 Frame = +3

Query: 534 RPSRXTAQXXXPPXXXXXPGXPXPXXRGPXLAXXXXPXPPXXLXPXPRXXXPXPANSXXF 713
           RPS        PP     P  P P    P  +    P PP    P P    P  + +   
Sbjct: 274 RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET 331

Query: 714 XPLPQXXLTSXHXCXXLXGXTXXXPXXXXXGXLPXXPXXR 833
             LPQ  L+       L   T   P     G LP  P  R
Sbjct: 332 PRLPQRNLS-------LSSSTPPLPSPGRSGPLPPPPSER 364


>BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 27/100 (27%), Positives = 31/100 (31%)
 Frame = +3

Query: 534 RPSRXTAQXXXPPXXXXXPGXPXPXXRGPXLAXXXXPXPPXXLXPXPRXXXPXPANSXXF 713
           RPS        PP     P  P P    P  +    P PP    P P    P  + +   
Sbjct: 274 RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET 331

Query: 714 XPLPQXXLTSXHXCXXLXGXTXXXPXXXXXGXLPXXPXXR 833
             LPQ  L+       L   T   P     G LP  P  R
Sbjct: 332 PRLPQRNLS-------LSSSTPPLPSPGRSGPLPPPPSER 364


>AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrome
           protein interacting protein protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 27/100 (27%), Positives = 31/100 (31%)
 Frame = +3

Query: 534 RPSRXTAQXXXPPXXXXXPGXPXPXXRGPXLAXXXXPXPPXXLXPXPRXXXPXPANSXXF 713
           RPS        PP     P  P P    P  +    P PP    P P    P  + +   
Sbjct: 83  RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET 140

Query: 714 XPLPQXXLTSXHXCXXLXGXTXXXPXXXXXGXLPXXPXXR 833
             LPQ  L+       L   T   P     G LP  P  R
Sbjct: 141 PRLPQRNLS-------LSSSTPPLPSPGRSGPLPPPPSER 173


>AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 27/100 (27%), Positives = 31/100 (31%)
 Frame = +3

Query: 534 RPSRXTAQXXXPPXXXXXPGXPXPXXRGPXLAXXXXPXPPXXLXPXPRXXXPXPANSXXF 713
           RPS        PP     P  P P    P  +    P PP    P P    P  + +   
Sbjct: 274 RPSIHREAVPPPPPQNNKP--PVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET 331

Query: 714 XPLPQXXLTSXHXCXXLXGXTXXXPXXXXXGXLPXXPXXR 833
             LPQ  L+       L   T   P     G LP  P  R
Sbjct: 332 PRLPQRNLS-------LSSSTPPLPSPGRSGPLPPPPSER 364


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 22/66 (33%), Positives = 22/66 (33%)
 Frame = +3

Query: 531  ARPSRXTAQXXXPPXXXXXPGXPXPXXRGPXLAXXXXPXPPXXLXPXPRXXXPXPANSXX 710
            A PS   A    PP     P  P P    P L     P PP    P PR   P P     
Sbjct: 947  ALPSEARAPPPPPPPPPHPP-LPPPPLPPPPLPLRLPPLPPP---PLPRPHPPPPPPLPP 1002

Query: 711  FXPLPQ 728
              P PQ
Sbjct: 1003 LLPPPQ 1008


>AB208996-1|BAD92233.1|  489|Homo sapiens ST8
           alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
           variant protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +3

Query: 567 PPXXXXXPGXPXPXXRGP-XLAXXXXPXPPXXL-XPXPRXXXPXPANS 704
           PP     PG   P  RGP  L     P PP  +  P PR   P P ++
Sbjct: 20  PPSSCSAPGPARPCLRGPAALRGSCQPQPPAPVASPHPRPGPPPPPHA 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,793,943
Number of Sequences: 237096
Number of extensions: 1058130
Number of successful extensions: 2469
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)