Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_C13
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   151   4e-37
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   151   4e-37
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188...    28   6.9  
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297...    28   6.9  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  151 bits (367), Expect = 4e-37
 Identities = 69/107 (64%), Positives = 83/107 (77%)
 Frame = -3

Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
           +RW   +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG    
Sbjct: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG---- 289

Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
            K G+   + A TE+D +EK ITPMGGFPHYG V  D++M +G   G
Sbjct: 290 -KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334



 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -1

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 140
           KGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQGQ 619
           ++  +   + IPVD+VF +DEMID I   +G+
Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  151 bits (367), Expect = 4e-37
 Identities = 69/107 (64%), Positives = 83/107 (77%)
 Frame = -3

Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
           +RW   +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG    
Sbjct: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG---- 289

Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
            K G+   + A TE+D +EK ITPMGGFPHYG V  D++M +G   G
Sbjct: 290 -KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334



 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = -1

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQGQ 619
           ++  +   + IPVD+VF +DEMID I   +G+
Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227


>08_02_0918 -
           22617388-22617693,22617799-22617848,22618538-22618817,
           22619654-22620340,22622870-22622944,22623150-22623285,
           22624801-22625093,22625776-22626597
          Length = 882

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
 Frame = -3

Query: 518 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 369
           ++V F    +   GY H + +N ++  I  G          IH+ D   +      E  L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419

Query: 368 SEKSITPMGGFPHYGEVNN 312
           SEKS  P+  FP    V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438


>08_01_0332 +
           2971361-2971439,2971596-2971783,2971985-2972062,
           2972354-2972425,2972513-2972631,2972858-2972942,
           2973096-2973185,2973268-2973369,2973448-2973624,
           2973874-2973954,2974511-2974582,2974662-2974756,
           2974831-2974919,2975016-2975078,2975161-2975204,
           2975554-2975685
          Length = 521

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 2   FFFFFFALSNVYFHGLHLRL 61
           FFFFFF  +N+ FH L+  L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,034,208
Number of Sequences: 37544
Number of extensions: 415306
Number of successful extensions: 1023
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)