Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_C13
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 173 8e-44
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 173 8e-44
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 173 8e-44
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 173 8e-44
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 173 8e-44
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 173 8e-44
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 173 8e-44
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 173 8e-44
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.7
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 4.7
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83109-8|CAB05521.2| 311|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 233 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 292
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 293 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 233 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 292
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 293 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 135 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 194
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 195 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 115 KDRIRE 98
+D + E
Sbjct: 293 RDFLAE 298
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 185 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 244
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 245 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 115 KDRIRE 98
+D + E
Sbjct: 343 RDFLAE 348
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 233 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 292
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 293 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 135 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 194
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 195 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 115 KDRIRE 98
+D + E
Sbjct: 293 RDFLAE 298
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 185 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 244
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 245 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 115 KDRIRE 98
+D + E
Sbjct: 343 RDFLAE 348
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 173 bits (422), Expect = 8e-44
Identities = 77/107 (71%), Positives = 91/107 (85%)
Frame = -3
Query: 599 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 420
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+
Sbjct: 233 SRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSAL 292
Query: 419 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 293 TEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 714 EWAXEHXXEPIPVDSVFAQDEMIDCIWCHQG 622
+WA EH + + VD+VFAQDEMID I +G
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 210 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 332
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 158 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 328
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 596 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 435
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
>Z83109-8|CAB05521.2| 311|Caenorhabditis elegans Hypothetical
protein F44G3.9 protein.
Length = 311
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 643 LHLVSPRAKDTKVSLLVGTQRSYPVRHTRVLGKLPALELGI 521
LHL S ++K ++ L+G +SY R L L A E+ I
Sbjct: 268 LHLESSKSKSGRLLFLLGELKSYSTRQLESLLDLKACEIVI 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,979,038
Number of Sequences: 27780
Number of extensions: 359441
Number of successful extensions: 915
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -