Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_C05
(955 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0019 + 40494709-40494767,40495619-40495703,40495777-404958... 33 0.33
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 33 0.44
03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451 32 0.77
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 31 1.8
04_04_0101 - 22800360-22800653,22801088-22801249 31 1.8
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 30 2.4
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271... 30 3.1
01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884... 30 3.1
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 29 4.1
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 29 5.5
02_03_0085 + 15063444-15063889,15064324-15065311 29 5.5
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 5.5
11_04_0195 - 14725553-14725571,14725988-14726079,14727214-147273... 29 7.2
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317... 29 7.2
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 28 9.5
11_01_0047 + 358370-360107,360713-361353 28 9.5
03_03_0138 + 14766592-14766754,14768052-14768476 28 9.5
01_05_0804 + 25378929-25379036,25379209-25379526,25379914-25380546 28 9.5
>01_07_0019 + 40494709-40494767,40495619-40495703,40495777-40495836,
40495934-40496044,40496127-40496204,40496276-40496347,
40496944-40497057,40498034-40498538,40499011-40499108,
40499185-40499215,40499346-40499520,40499849-40500008,
40501436-40501855,40502313-40503203
Length = 952
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 255 CLATWCSPRPALXTA-AEEESPIDCYVKVMVVYLRSGSAXQRLVASLVVSAWARHTRRR- 82
C A SP A+ E+ D Y++ V Y + A L ++L+++AW+R R
Sbjct: 837 CAAGELSPARAVRLVRGAAEAVTDAYMRSAVDYFEATRARPSLASTLLITAWSRLPFRAA 896
Query: 81 --GLYPPARPPPRTAMDEEIMM 22
G PPA P + E+ +
Sbjct: 897 DFGWGPPAAYGPAALPEREVAL 918
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 102 PRPTPRGWPPGAAX-RCPIGGTPPSPSRSNRWGSLLPPLXSMPG 230
PR PR PPG A R P+G PP P+R + PP + PG
Sbjct: 417 PRRPPRR-PPGLARPRKPLGRRPPGPARPGKPLGRRPPGPARPG 459
>03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451
Length = 228
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 108 PTPRGWPPGAAXRCPIG-GTPPSPSRSNRWGSLLPPL 215
P PRG PP A P+G P P RS SL PL
Sbjct: 175 PLPRGSPPPYAQSVPVGPAAAPPPPRSGASSSLQAPL 211
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 102 PRPTPRGWPPGAAXRCPIGGTPPSPSRSNRWGSLLPPLXSMPGAGCT 242
P P P PP A P PP P +S G PP +MPG+ T
Sbjct: 583 PVPPPEPSPPPAPKAAP----PPPPPKSTGPGPPRPPPPAMPGSSKT 625
>04_04_0101 - 22800360-22800653,22801088-22801249
Length = 151
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -1
Query: 211 GGRREPHRLLREGDGGVPPIGQRXAAPGGQP 119
GGRR LLR DGG + Q A GGQP
Sbjct: 8 GGRRSSRALLRVSDGGSAAVDQ--ATAGGQP 36
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 102 PRPTPRGWP---PGAAXRCPIGGTPPSPSRSNRWGSLLP-PLXSMPGAG 236
P PTPRG+P P P GG+ G+ P P S+PG G
Sbjct: 197 PPPTPRGFPPPLPSPGAGAPRGGSATPAMIPGHPGAFYPFPPPSLPGVG 245
>10_08_0809 -
20725858-20725950,20726375-20726545,20726895-20727101,
20727208-20727879
Length = 380
Score = 29.9 bits (64), Expect = 3.1
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 309 GTRTCRGRIASPPTXWGTCLA--TWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQ 136
G R +ASPP T +P P L + E IDC +V Y RSG A +
Sbjct: 57 GGGNARNTLASPPPPSFPLPVPLTTTTPCPPLHEVSFEFDSIDCLGEVCNPYKRSGGAVR 116
Query: 135 RLVASLVVSA 106
A+ V+ A
Sbjct: 117 ATAAAQVMVA 126
>01_06_0802 +
32087661-32087965,32088106-32088220,32088302-32088421,
32089678-32089788,32090084-32090122,32090965-32091069,
32091149-32091187,32091923-32092015
Length = 308
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 102 PRPTPRGWPPGAAXRCPIGGTPPSPSRSNRW---GSLLP 209
PRP P+ PP P SPSR W GSLLP
Sbjct: 25 PRPKPQPNPPHRFLHAPSSPAAASPSRLPLWRSTGSLLP 63
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 247 YXVQPAPGIXYSGGRREPHRLLREGDGGVPPI 152
Y V+P SGGR PH++ G G VP +
Sbjct: 206 YGVEPTESAILSGGRPGPHKIQGIGAGFVPGV 237
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -2
Query: 168 VVYLRSGSAXQRLVASLVVSAWARHTRRRGLYPPARPPPRTAMD 37
VV+LR G+A VA L++S R R++ PP PPPR+ D
Sbjct: 20 VVFLRVGAAVALSVAGLLLS--RRRPRQQLRLPP--PPPRSDSD 59
>02_03_0085 + 15063444-15063889,15064324-15065311
Length = 477
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 159 LRSGSAXQRLVASLVVSAWARHTRRRGLYPPARPPPRT 46
LR+ + RL + + W R R RGL PP P P +
Sbjct: 26 LRAILSSSRLPTTTPLHHWPRRRRSRGLPPPPPPSPHS 63
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = -2
Query: 279 SPPTXWGTCLATWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQRLVASLVVSAWA 100
SPP+ + S P+ AA S V+V + G LV L+V +
Sbjct: 42 SPPSLTPPAAPSPPSTTPSSPAAAAAASSSGLTTPVVVGIVVGGLVVLLLVTILLVCLFK 101
Query: 99 RHTRRRGLYPPARPPP 52
+ R +PP PPP
Sbjct: 102 KKKRHHHHHPPPPPPP 117
>11_04_0195 -
14725553-14725571,14725988-14726079,14727214-14727335,
14727588-14727597,14727798-14727896,14728046-14728612
Length = 302
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 PRPTP--RGWPPGAAXRCPIGGTPPSPSRSNRWGSLLPPLXSMPGA 233
PRP+ RG PP + P G P P R R +L PL S GA
Sbjct: 2 PRPSRSRRGRPPSSPPPRPAAGATPRPHR-RRGQIVLLPLGSAAGA 46
>01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,
3179892-3179999
Length = 957
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -2
Query: 261 GTCLATWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQRLVASLVVSAWARHTRRR 82
G L+T CS +L E++P+D +V++L +G A +V AW R+R
Sbjct: 844 GLPLSTGCSNTTSLNVIPSEKNPVD-----IVLFLSAGLGFGLGFAIAIVVAWGIPIRKR 898
Query: 81 GLY 73
+
Sbjct: 899 STF 901
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 247 YXVQPAPGIXYSGGRREPHRLLREGDGGVPPI 152
Y V+P SGG+ PH++ G G VP +
Sbjct: 212 YGVEPVESAVLSGGKPGPHKIQGIGAGFVPGV 243
>11_01_0047 + 358370-360107,360713-361353
Length = 792
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 145 AARSEVHHHHLHVAIDG 195
AA + HHHH+H A DG
Sbjct: 28 AAAAAAHHHHVHAAGDG 44
>03_03_0138 + 14766592-14766754,14768052-14768476
Length = 195
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 241 PXSKTXAPXCRRRGNAPATRSCPARRW 321
P S+ AP RRRG TR C RRW
Sbjct: 42 PLSRCFAPPHRRRG-IMLTRLCKGRRW 67
>01_05_0804 + 25378929-25379036,25379209-25379526,25379914-25380546
Length = 352
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 108 AWARHTRRRGLYPPARPPPRTAM 40
A R R +GL PP PPP TA+
Sbjct: 296 AAVRTCREKGLLPPLPPPPTTAV 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,022,844
Number of Sequences: 37544
Number of extensions: 347851
Number of successful extensions: 1503
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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