Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_C05
         (955 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro...    48   1e-05
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase...    48   1e-05
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA...    48   1e-05
AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.     29   7.1  
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ...    29   7.1  
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA...    29   7.1  

>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
           protein.
          Length = 1221

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -2

Query: 312 RGTRTCRGRIASPPTXWGTCLATWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQR 133
           R     R RI+S     G        P P +    + ESP DCY KV++ +L + SA QR
Sbjct: 45  RDANFMRARISSSRAL-GALSHYLVQPAPGVVYTPQTESPTDCYTKVLLGHLNAHSAVQR 103

Query: 132 LVASLVVSAWA 100
           +V  L+++ WA
Sbjct: 104 IVCGLIIAFWA 114


>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
           protein.
          Length = 1924

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -2

Query: 312 RGTRTCRGRIASPPTXWGTCLATWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQR 133
           R     R RI+S     G        P P +    + ESP DCY KV++ +L + SA QR
Sbjct: 747 RDANFMRARISSSRAL-GALSHYLVQPAPGVVYTPQTESPTDCYTKVLLGHLNAHSAVQR 805

Query: 132 LVASLVVSAWA 100
           +V  L+++ WA
Sbjct: 806 IVCGLIIAFWA 816


>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
           protein.
          Length = 1929

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -2

Query: 312 RGTRTCRGRIASPPTXWGTCLATWCSPRPALXTAAEEESPIDCYVKVMVVYLRSGSAXQR 133
           R     R RI+S     G        P P +    + ESP DCY KV++ +L + SA QR
Sbjct: 753 RDANFMRARISSSRAL-GALSHYLVQPAPGVVYTPQTESPTDCYTKVLLGHLNAHSAVQR 811

Query: 132 LVASLVVSAWA 100
           +V  L+++ WA
Sbjct: 812 IVCGLIIAFWA 822


>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 102  PRPTPRGWPPGAAXRCPIGGTPPSP-SRSNRWGSLLPP 212
            P PTPR          P    PPSP SRS+ + S LPP
Sbjct: 1628 PPPTPRSHYHSDVRIVPESSCPPSPSSRSSTYFSPLPP 1665


>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
            protein LRP6 protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 102  PRPTPRGWPPGAAXRCPIGGTPPSP-SRSNRWGSLLPP 212
            P PTPR          P    PPSP SRS+ + S LPP
Sbjct: 1628 PPPTPRSHYHSDVRIVPESSCPPSPSSRSSTYFSPLPP 1665


>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
            protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 102  PRPTPRGWPPGAAXRCPIGGTPPSP-SRSNRWGSLLPP 212
            P PTPR          P    PPSP SRS+ + S LPP
Sbjct: 1628 PPPTPRSHYHSDVRIVPESSCPPSPSSRSSTYFSPLPP 1665


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,417,659
Number of Sequences: 53049
Number of extensions: 506966
Number of successful extensions: 2227
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)