Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_B22
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 174 7e-44
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 174 7e-44
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 174 7e-44
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 174 7e-44
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 174 7e-44
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 174 7e-44
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 158 4e-39
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 158 4e-39
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.6
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 236 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 283
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 284 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 236 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 283
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 284 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 78 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 138 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 185
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 186 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 245
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 246 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 236 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 283
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 284 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 78 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 138 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 185
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 186 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 245
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 246 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 174 bits (423), Expect = 7e-44
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = -3
Query: 770 KXXHIMESNLTGYHRGQS-EMGQRTXGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 594
K H++E + G Q + + + + VD+VFAQDEMID I TSRW
Sbjct: 176 KKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 593 HTKKLPP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSI----VLDQG 426
HTKKLP T + L K+ + G R V TV + +K +++
Sbjct: 236 HTKKLPR-KTHKGLRKVACI--GAWHPSR---------VAFTVARAGQKGFHHRTIINNK 283
Query: 425 IHKKDGKVI----KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 258
I++ + KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 284 IYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 257 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 158 bits (384), Expect = 4e-39
Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 8/202 (3%)
Frame = -3
Query: 671 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPP*DTPRVLGKLPALELGILLGCRSL*LV 492
V A +MID I TSRWHTKKLP T + L K+ + G R
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR-KTHKGLRKVACI--GAWHPSR----- 213
Query: 491 LVRKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGF 336
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGF
Sbjct: 214 ----VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGF 269
Query: 335 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 156
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 270 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 329
Query: 155 TPADKAAFMGTLKKDRIREEAA 90
T A+K AFMG LK+D + E A
Sbjct: 330 TTAEKRAFMGKLKRDFLAEAEA 351
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 158 bits (384), Expect = 4e-39
Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 8/202 (3%)
Frame = -3
Query: 671 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPP*DTPRVLGKLPALELGILLGCRSL*LV 492
V A +MID I TSRWHTKKLP T + L K+ + G R
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR-KTHKGLRKVACI--GAWHPSR----- 213
Query: 491 LVRKVIITVLK*TRKSI----VLDQGIHKKDGKVI----KNNASTEYDLSEKSITPMGGF 336
V TV + +K +++ I++ + KNN STE+DL++K+ITPMGGF
Sbjct: 214 ----VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGF 269
Query: 335 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 156
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 270 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 329
Query: 155 TPADKAAFMGTLKKDRIREEAA 90
T A+K AFMG LK+D + E A
Sbjct: 330 TTAEKRAFMGKLKRDFLAEAEA 351
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 591 HKEATPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
H + P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 500
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -1
Query: 154 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 11
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,193,616
Number of Sequences: 27780
Number of extensions: 426062
Number of successful extensions: 1111
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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