Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_B18
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0328 - 7487759-7488340 31 0.87
11_06_0692 + 26327487-26328509 31 1.1
06_03_1448 + 30235336-30236763 31 1.5
06_03_1443 + 30182018-30183445 31 1.5
06_03_1440 + 30166515-30167942 31 1.5
06_03_1437 + 30151030-30152457 31 1.5
06_03_1429 + 30100834-30102261 31 1.5
06_03_1425 + 30084383-30085810 31 1.5
06_03_1420 - 30053713-30055140 31 1.5
11_01_0443 - 3399226-3399242,3399551-3399731,3399847-3399936,340... 30 2.0
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331... 29 3.5
02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545 29 6.1
01_01_0575 - 4271910-4272371,4272923-4272928,4272999-4273174,427... 29 6.1
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152... 28 8.1
>03_02_0328 - 7487759-7488340
Length = 193
Score = 31.5 bits (68), Expect = 0.87
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 377 PRRARWLTWPHPSPKTRHLGSSRSTNGASRY-FKHRSPFSSNPSL-ATKGSTIKLTP--R 210
P ++ T+P+P P + S R++ ++R + R P PS TKG T K P R
Sbjct: 48 PAATKYATFPYPPPPQQPPRSGRASTPSTRQRDRRRKPSRPPPSTETTKGGTQKKKPLER 107
Query: 209 HSPLSFSP 186
+PL +P
Sbjct: 108 ATPLPPAP 115
>11_06_0692 + 26327487-26328509
Length = 340
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = -3
Query: 422 RCRPQKPQRLK*VQHPRRARWLTWPHPSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLA 243
R R + +R P R RW P P+P+T + +T ASR S SS S +
Sbjct: 150 RIRSRSVRRKARSMSPFRTRWRA-PSPAPETAEEVEAVATPAASRSSSSSSTASSASSTS 208
Query: 242 TKGS 231
++GS
Sbjct: 209 SRGS 212
>06_03_1448 + 30235336-30236763
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1443 + 30182018-30183445
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1440 + 30166515-30167942
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1437 + 30151030-30152457
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1429 + 30100834-30102261
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1425 + 30084383-30085810
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>06_03_1420 - 30053713-30055140
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 449 PCSYHRHAERCRPQKPQRLK*VQHPRRARWLTWPHPSPKT 330
P SY R R +P R + V HP R TW P P T
Sbjct: 301 PTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVT 340
>11_01_0443 -
3399226-3399242,3399551-3399731,3399847-3399936,
3400377-3400459,3400540-3400667,3400747-3401002,
3401094-3401199,3401300-3401366,3401467-3401580,
3401811-3401889,3402189-3402359,3403135-3403267,
3403874-3404033,3404119-3404261
Length = 575
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -3
Query: 341 SPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTIKLTPRH 207
S T+H SS T AS KH S + P T T +LTP H
Sbjct: 523 SEVTKH--SSEVTKHASEVTKHTSEVTKQPPELTSSHTSQLTPAH 565
>11_01_0432 +
3313060-3313107,3313610-3313753,3314510-3314662,
3315283-3315792,3315888-3317423,3317505-3317573,
3317742-3317807,3318517-3318640,3319464-3319690
Length = 958
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 248 LATKGSTIKLTPRHSPLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 78
L TKG + +T H P+ FSP S G E+ L + S GL P+S+
Sbjct: 203 LETKGKRLSVTVTHFPMIFSPISSRTFVLPSEGTMAESCLSNHHEDSLSPGLPPIST 259
>02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545
Length = 358
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 359 LTWPHPSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTIKLTPRHSPLSFSPDL 180
L PHP P R R+ G FK S +S GS+ +P HSP+S++P +
Sbjct: 79 LASPHP-PLPRRRAEIRTREGDPEDFKEDSVGASQDV----GSSDHESPLHSPVSYNPPI 133
>01_01_0575 -
4271910-4272371,4272923-4272928,4272999-4273174,
4274150-4275299
Length = 597
Score = 28.7 bits (61), Expect = 6.1
Identities = 24/91 (26%), Positives = 41/91 (45%)
Frame = -3
Query: 425 ERCRPQKPQRLK*VQHPRRARWLTWPHPSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSL 246
E+ +KP + Q+ +RAR + P P +++ S S G+S R+P S +
Sbjct: 486 EKADRRKPSGMNRFQNNKRARGASGPQSFPPSKYSRGSNSNYGSS----FRNPASHSFPY 541
Query: 245 ATKGSTIKLTPRHSPLSFSPDLLSGSRFRSG 153
+ + P P F+P G+R R+G
Sbjct: 542 TDRAGFVGPAPGARP-HFAPGSSMGTR-RAG 570
>06_01_0196 +
1520015-1520191,1520483-1520527,1521851-1521910,
1522246-1522358,1522432-1522642,1523087-1523133,
1523211-1523369,1523521-1523624,1524300-1524634
Length = 416
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 214 GVNLIVEPFVASDGFDENGDRCLKYLEAP 300
G+NL E SDGFDE D C LE P
Sbjct: 274 GLNLSSE---VSDGFDEGADACAVCLERP 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,373,820
Number of Sequences: 37544
Number of extensions: 424777
Number of successful extensions: 1070
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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