Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_B12
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 84 7e-16
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 84 7e-16
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 84 7e-16
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 84 7e-16
U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform pro... 47 1e-04
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 47 1e-04
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 47 1e-04
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 47 1e-04
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 47 1e-04
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 47 1e-04
AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cat... 33 1.0
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 32 2.4
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 32 2.4
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 32 2.4
BC084553-1|AAH84553.1| 371|Homo sapiens glutamate receptor, ion... 31 5.4
BC041788-1|AAH41788.2| 371|Homo sapiens glutamate receptor, ion... 31 5.4
AB097026-1|BAC77379.1| 371|Homo sapiens putative MAPK activatin... 31 5.4
BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein pr... 31 7.2
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 31 7.2
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 31 7.2
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 9.5
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 9.5
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 9.5
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 9.5
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 30 9.5
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 9.5
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 9.5
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 9.5
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 9.5
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 9.5
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 83.8 bits (198), Expect = 7e-16
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVV-KKT 424
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA + KK
Sbjct: 423 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRKKG 479
Query: 423 VQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRG 247
+ + P G G KLP N D PDPERWLP ER+ YR +++G
Sbjct: 480 GKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKG 537
Query: 246 IRRDVI-KGSQGMSTTATDQYD 184
++D I KG+QG + A+ + D
Sbjct: 538 KKKDQIGKGTQGATAGASSELD 559
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 83.8 bits (198), Expect = 7e-16
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVV-KKT 424
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA + KK
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRKKG 534
Query: 423 VQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRG 247
+ + P G G KLP N D PDPERWLP ER+ YR +++G
Sbjct: 535 GKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKG 592
Query: 246 IRRDVI-KGSQGMSTTATDQYD 184
++D I KG+QG + A+ + D
Sbjct: 593 KKKDQIGKGTQGATAGASSELD 614
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 83.8 bits (198), Expect = 7e-16
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVV-KKT 424
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA + KK
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRKKG 534
Query: 423 VQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRG 247
+ + P G G KLP N D PDPERWLP ER+ YR +++G
Sbjct: 535 GKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKG 592
Query: 246 IRRDVI-KGSQGMSTTATDQYD 184
++D I KG+QG + A+ + D
Sbjct: 593 KKKDQIGKGTQGATAGASSELD 614
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 83.8 bits (198), Expect = 7e-16
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVV-KKT 424
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA + KK
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRKKG 534
Query: 423 VQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRG 247
+ + P G G KLP N D PDPERWLP ER+ YR +++G
Sbjct: 535 GKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKG 592
Query: 246 IRRDVI-KGSQGMSTTATDQYD 184
++D I KG+QG + A+ + D
Sbjct: 593 KKKDQIGKGTQGATAGASSEVD 614
>U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform
protein.
Length = 239
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 164 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 218
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 532
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 532
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 532
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 532
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -2
Query: 600 PGNARSLARLVKALAAADPPRARSLAEQLPPLDQLETKIDIDALESSKWMMGAKVVKK 427
P + +LA+L+ A + DP +A++L++ LP D + K+D++ALE+S GA ++K
Sbjct: 478 PKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENS---AGATYIRK 532
>AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cation
channel 3 isoform c variant protein.
Length = 446
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 518 SCRPWTSSRRKSILTPWNRR 459
+C PWTSS R S + PW+RR
Sbjct: 397 TCWPWTSSLRPSTMRPWSRR 416
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXPXS 727
P P P P A PP P +P P P P P P S
Sbjct: 331 PPRPLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSS 374
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXPXS 727
P P P P A PP P +P P P P P P S
Sbjct: 331 PPRPLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSS 374
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXPXS 727
P P P P A PP P +P P P P P P S
Sbjct: 94 PPRPLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPPPPPTPSS 137
>BC084553-1|AAH84553.1| 371|Homo sapiens glutamate receptor,
ionotropic, N-methyl D-asparate-associated protein 1
(gluta protein.
Length = 371
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXP 721
PG P+P P PP P AP P P P P
Sbjct: 22 PGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSP 63
>BC041788-1|AAH41788.2| 371|Homo sapiens glutamate receptor,
ionotropic, N-methyl D-asparate-associated protein 1
(gluta protein.
Length = 371
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXP 721
PG P+P P PP P AP P P P P
Sbjct: 22 PGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSP 63
>AB097026-1|BAC77379.1| 371|Homo sapiens putative MAPK activating
protein protein.
Length = 371
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 596 PGXPRPXXPXARAPPXPXAPXXPXXXXXXPXXXPXXXXXPXP 721
PG P+P P PP P AP P P P P
Sbjct: 22 PGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSP 63
>BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein
protein.
Length = 1083
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -2
Query: 639 GGARAXGXXGRGXPGNARSLARLV--KALAAADPPRARSLAEQLPPLDQLETKIDIDALE 466
GG R R G +S+ L +L++ PP + +A+ L D L ++ + E
Sbjct: 479 GGGRLQAL--RSLSGTPKSMTSLSPRSSLSSPSPPCSPLMADPLLAGDALLNSLEFEDPE 536
Query: 465 SSKWMMGAKVVKKTVQSKQEQSPGTPGSELGQ 370
S + + + + + PGT G +LGQ
Sbjct: 537 LSATLCELSLGNSAQERYRLEEPGTEGKQLGQ 568
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = -3
Query: 398 PELPALSWDRRRKRNASATANSRRTQTS------PNLPIRKGGCQSTSELRTESDEALD- 240
P+ LS DRR R A +A+S+ +S P+ ++GGC E + AL
Sbjct: 151 PQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQP 210
Query: 239 VTSSRVAKECPP 204
V R+A PP
Sbjct: 211 VQLPRLALSPPP 222
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 315 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 214
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRG 2147
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 741 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 779
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 314 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 352
>AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ30579 fis, clone BRAWH2006989, weakly similar to
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
2.7.7.6). ).
Length = 260
Score = 30.3 bits (65), Expect = 9.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 138 SWQRSPG*AWSAVYSCHIDPWQWW 209
SW SP +++S H PW WW
Sbjct: 174 SWSHSPHSRSHSLWSSHSSPWFWW 197
>AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ14749 fis, clone NT2RP3002876, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 613
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 173 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 211
>AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens
cDNA FLJ14536 fis, clone NT2RM2001105, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 527
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 87 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 125
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1559 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1597
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1487 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1525
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 299 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 183
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1499 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,744,235
Number of Sequences: 237096
Number of extensions: 1434902
Number of successful extensions: 6148
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5892
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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