Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_B08
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3128|AAF49173.1|  224|Drosophila melanogaster CG14089-P...    32   1.0  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    29   5.5  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    29   5.5  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    29   5.5  

>AE014296-3128|AAF49173.1|  224|Drosophila melanogaster CG14089-PA
           protein.
          Length = 224

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +3

Query: 561 PPGEXGXXXXPPVPGPPLXQXXXXXXXXSXXXXPXWPWPPPXPXSXXSH 707
           P G+ G    P +PG P  Q        S    P +P+PPP P     H
Sbjct: 119 PRGDKGHPGMPGIPGQPGPQGPPGYPGGS---YPPYPYPPPPPPPSHGH 164


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 229 HAPHHALCSHDHSGSGVRSQVLERLEM 309
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 229 HAPHHALCSHDHSGSGVRSQVLERLEM 309
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 229  HAPHHALCSHDHSGSGVRSQVLERLEM 309
            H PHH    H H+G+G   Q  E+L++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQL 971


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,262,707
Number of Sequences: 53049
Number of extensions: 304579
Number of successful extensions: 877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)