Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_B05
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810... 34 0.12
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 33 0.27
11_04_0475 - 18176578-18177252,18180101-18180664 32 0.63
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.1
11_01_0522 - 4103138-4103926 31 1.5
11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260... 30 1.9
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 30 2.5
12_02_0442 - 19118536-19119222 29 3.4
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 29 3.4
02_05_0107 + 25897487-25898059 29 3.4
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 29 3.4
01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701 29 3.4
04_03_0515 + 16698589-16701066 29 4.4
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 29 4.4
12_01_1111 + 11842837-11843094,11843142-11843255,11843267-118442... 29 5.9
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 5.9
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 29 5.9
11_06_0202 - 21184217-21184503,21184622-21184982 28 7.8
09_06_0362 + 22545891-22546541 28 7.8
02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058 28 7.8
02_04_0170 + 20576149-20576889 28 7.8
>09_04_0323 -
16679565-16679939,16680328-16680660,16680721-16681032,
16683590-16683825,16683972-16684239
Length = 507
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 315 MGRLDARGRTAGLLSIHESEARESAAHDMDHDEPVAAPRDGPVRLL-PEPAALRGASPER 139
MG A G+ A + R AA D +EPV P P +L PAA P R
Sbjct: 1 MGLSPAEGKPAWT-DERSAAGRRQAARDKGKEEPVTLPPLPPAAVLGSSPAARTRLRPRR 59
Query: 138 LRTAALRPPP 109
++A PPP
Sbjct: 60 RPSSAPHPPP 69
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 447 PQEEEILQNQLPKRNPTERETSEQGCDHSLRQQHGANRPQHRRGRRDQ 590
PQE++ Q Q + P E+ EQ +QQ NRPQ ++ ++ Q
Sbjct: 567 PQEQQQQQQQKQQIKPQEKMGKEQTKPEEQQQQQKTNRPQEQQHKKPQ 614
>11_04_0475 - 18176578-18177252,18180101-18180664
Length = 412
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Frame = -2
Query: 273 SIHESEARESAAHDMDHD---EPVAAPRDGPVRLLPEPAALRGAS------PERLRTAAL 121
S H S + S A DMD D EP AA P P PA AS PE L A
Sbjct: 3 SAHSSHSSVSTAADMDEDDDDEPSAASAAAPAPPAPAPAPPASASKVLEQEPEELPCRAA 62
Query: 120 RPPPGPQ 100
P PQ
Sbjct: 63 DSPLSPQ 69
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 177 PEPAALRGASPERLRTAALRPPPGPQRLHG 88
P PA RG +P + PPP P R HG
Sbjct: 1164 PPPAGFRGGTPPPNAHGGVAPPPPPPRGHG 1193
>11_01_0522 - 4103138-4103926
Length = 262
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 243 AAHDMDHDEPVAAPRDG 193
AAH+ DHDEP AAP G
Sbjct: 163 AAHEADHDEPAAAPAYG 179
>11_05_0081 -
18924353-18924462,18925068-18925187,18925569-18926086,
18927392-18927471,18927680-18927782,18928084-18928295,
18928392-18929210,18929331-18929444,18929935-18929983,
18930115-18930271,18930354-18930807,18930938-18931147
Length = 981
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -2
Query: 291 RTAGLLSIHESEARESAAHDMDHDEPVAAPRDGPVRLLPEPAALRGASPERLRTAA 124
RTAG LS S R+SA P++AP R P P + G P R TAA
Sbjct: 27 RTAGPLS-KRSGMRKSARFAESVSAPLSAPSGVARRGAPPPPPITGLPPARRPTAA 81
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 264 ESEARESAAHDMDHDEPVAAPRDGPVRLLPEPAALRGASPERLRTAALRPPPGP 103
E E E + +E AP P PEPA + P + PPP P
Sbjct: 56 EGEEEEEKKQQREEEEEAPAPAPAPA---PEPAPRKARLPRACNSKPKPPPPPP 106
>12_02_0442 - 19118536-19119222
Length = 228
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -2
Query: 222 DEPVAAPRDGPVRLLPEPAALRGASPERLRTAALRPPPGPQRLHGYQRRAQ 70
+EP APR G R P A R S +R P P P L G R +
Sbjct: 16 EEPPKAPRQGLGRAKPRSEATRWQSRRPVRRLDRSPDPPPPLLPGADGREE 66
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 432 AVDHHPQEEEILQNQLPKRNPTERETSEQGCDHSLRQQHGANRPQ 566
A D+H E+E Q L +RN T+ +EQG + +HG + Q
Sbjct: 490 AFDNHQSEDE--QVPLNQRNGTDDFNNEQGVGNQTGDEHGQDNHQ 532
>02_05_0107 + 25897487-25898059
Length = 190
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 195 GPVRLLPEPAALRGASPERLRTAALRPPPGPQRLHGYQRRAQKKTILQ 52
G +RL P P A G SP + + PP PQ+ +R +K +L+
Sbjct: 33 GYLRLQPCPGAAGGRSPLLAAGSVKKQPPPPQQQIVVHQRGGEKAVLK 80
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2
Query: 291 RTAGLLSIHESEARESAAHDMDHDEPV--AAPRDGPVRLLPEPAALRGASPERLRTAALR 118
R GL ++ E D D PV + PRDG +LL EP L G SP +
Sbjct: 558 RVQGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDG--KLLTEPVPLVGRSPAPSSASGAS 615
Query: 117 PPP 109
PP
Sbjct: 616 SPP 618
>01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701
Length = 369
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = -3
Query: 302 MLAAGPLAYYLYTRAKPESQPLMIWI-----TTNPWQRREMGPYGYYLNRPPSAERRPSD 138
++A GP A+ L A P +Q + W+ T + Q+ E YGY + P+ +RR D
Sbjct: 123 LVATGPRAF-LMAMALPLAQSAISWVVSFFTTRSRRQQEEEESYGYDYDDDPAFQRREED 181
>04_03_0515 + 16698589-16701066
Length = 825
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 QKCKL*ITIHRKRRFCKTSSQNGTLRNAKRLNKAAIILCASSTAPTAHNTVGAAV---TR 591
+K +L T R+RR TS + T R ++I+ ++ + TA +T AA R
Sbjct: 45 EKPRLLTTARRRRRRRSTSVMSQTTAPMSRRRLSSILASTATASSTAASTTTAATASPAR 104
Query: 592 PSP 600
PSP
Sbjct: 105 PSP 107
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 408 HQHRPEM*AVDHHPQEEEILQNQLPKRNPTERETSEQGCDHSLRQQHGANRPQHRRGRRD 587
HQH + Q++++ Q Q ++ +++ +Q +QQ N+PQH +
Sbjct: 49 HQHLQQQ--QQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQ 106
Query: 588 QT 593
QT
Sbjct: 107 QT 108
>12_01_1111 +
11842837-11843094,11843142-11843255,11843267-11844247,
11861747-11862025,11862998-11863098,11863723-11863792,
11863947-11863974,11864057-11864114,11864440-11864536
Length = 661
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -2
Query: 270 IHESEARESAAHDMDHDEPVAAPRDGPVRLLPEPAALRGASPERLRTAALRP---PPGPQ 100
+H + + D H E ++ + G V L P + +SP + A P P +
Sbjct: 215 LHPLDKGTAVMEDETHHELPSSKKKGVVVLQSVPTQQQSSSPSSSKLRADAPEFIPSSIK 274
Query: 99 RLHGYQRRAQKKTILQ 52
+ +RRA+KK LQ
Sbjct: 275 KSRASRRRAKKKRTLQ 290
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 407 SPAPPRNVSCRSPSTGRGDFAKPAPKTEP 493
SP PP ++ PST RG+ PAP + P
Sbjct: 328 SPPPPADI----PSTSRGEVTPPAPPSPP 352
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 213 VAAPRDGPV--RLLPEPAALRGASPERLRTAALRPPPGPQRLHGYQRRAQKKTIL 55
VA+PRD P+ R PEP + PE + RP P P ++ A+++++L
Sbjct: 436 VASPRDSPIASRPRPEPLVASPSGPEPPVASPPRPEP-PVASPRNEKDAEEQSVL 489
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 222 DEPVAAPRDGPVRLLPEPAALRGASPERLRT-AALRPPPGPQRLHG 88
+ P A P P P A + +SP + + L PPP P HG
Sbjct: 145 ESPAATPAQSPTAAPSLPQAPKPSSPPPFTSPSPLPPPPPPPTSHG 190
>09_06_0362 + 22545891-22546541
Length = 216
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 168 AALRGASPERLRTAALRPPPGPQRLHGYQRRAQKKTILQV 49
A+ A PE R+ A PPP Q+L G ++R K ++
Sbjct: 41 ASAAAAEPEHRRSPAPPPPPRQQQLIGVRKRPWGKFAAEI 80
>02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058
Length = 365
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 216 PVAAPRDGPVRLLPEPAALRGASPERLRTAALRPPP 109
PVA P+ G L P PAA+ P AA+ PPP
Sbjct: 228 PVAPPQAGTWPL-PAPAAMPPPPPPPTGAAAVAPPP 262
>02_04_0170 + 20576149-20576889
Length = 246
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 216 PVAAPRDGPVRLLPEPAALRGASPERLRTAALRPPP 109
PVA P+ G L P PAA+ P AA+ PPP
Sbjct: 109 PVAPPQAGTWPL-PAPAAMPPPPPPPTGAAAVAPPP 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,969,271
Number of Sequences: 37544
Number of extensions: 452709
Number of successful extensions: 1986
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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