Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_B04
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    30   3.3  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   4.3  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   4.3  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    29   5.7  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    29   5.7  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    29   5.7  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 28/111 (25%), Positives = 29/111 (26%), Gaps = 1/111 (0%)
 Frame = +3

Query: 396 PPPPXAXATXGXRCPXRPXXSTRXLP*YXHERRKPPXXVXXWXAXHAXXPXXXPRXTXRH 575
           PPPP    T     P     +TR    Y     KPP  V              P  T   
Sbjct: 314 PPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPVTT-RRPTPPPTRPPPPPTRAS 372

Query: 576 XPXPXXXPXXXXXXFSXKXXFYXR-XPNXXPPPXSXXLNPPXXXXXPPXPR 725
            P P   P               R  P   PPP      PP     PP  R
Sbjct: 373 TPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVR 423



 Score = 29.9 bits (64), Expect = 4.3
 Identities = 34/116 (29%), Positives = 37/116 (31%)
 Frame = +3

Query: 387 RXHPPPPXAXATXGXRCPXRPXXSTRXLP*YXHERRKPPXXVXXWXAXHAXXPXXXPRXT 566
           R  PPPP        R P RP  +TR    Y     KP   V          P   PR  
Sbjct: 226 RLPPPPPPPRTPPPTRPPTRPP-TTRPPATYLPPTNKPLPPV----TTRLPPPPPSPRT- 279

Query: 567 XRHXPXPXXXPXXXXXXFSXKXXFYXRXPNXXPPPXSXXLNPPXXXXXPPXPRIPP 734
               P P   P       +     Y    N   PP +  L PP     PP PR PP
Sbjct: 280 ----PPPTRPPTRPPT--TRPPATYLPPTNKPLPPVTTRLPPP-----PPPPRTPP 324


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +2

Query: 683 P*PXXXXXXPPPXPDPXXXXXPXXXXXIPXXPXPPSXTPXXNP 811
           P P      PPP P P     P      P  P  P  TP   P
Sbjct: 199 PRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGP 241


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +2

Query: 683 P*PXXXXXXPPPXPDPXXXXXPXXXXXIPXXPXPPSXTPXXNP 811
           P P      PPP P P     P      P  P  P  TP   P
Sbjct: 199 PRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGP 241


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 226 HAPHHALCSHDHSGSGVRSQVLERLEM 306
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 226 HAPHHALCSHDHSGSGVRSQVLERLEM 306
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 226  HAPHHALCSHDHSGSGVRSQVLERLEM 306
            H PHH    H H+G+G   Q  E+L++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQL 971


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,693,034
Number of Sequences: 53049
Number of extensions: 313705
Number of successful extensions: 1607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)